GLYMA02G27230 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA02G27230 T245177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.727 0.727
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA02G27230.1 LOB 45 144

Links

Other LOB family TFs
Other Glycine max TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I
Aquca_001_00195 Aquilegia coerulea Aquca_001_00195 I
ATMYB68 Arabidopsis thaliana AT5G65790 I
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I
BGIOSGA029715 Oryza indica BGIOSGA029715 I
Bo2g168190 Brassica oleracea Bo2g168190 I
Bo3g097710 Brassica oleracea Bo3g097710 I
Bo8g078940 Brassica oleracea Bo8g078940 I
Bo9g018910 Brassica oleracea Bo9g018910 I
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I
Bostr.6864s0273 Boechera stricta Bostr.6864s0273 I
Bra011785 Brassica rapa Bra011785 I
Bra017963 Brassica rapa Bra017963 I
Bra024419 Brassica rapa Bra024419 I
Bra031847 Brassica rapa Bra031847 I
Bra037828 Brassica rapa Bra037828 I
BRADI1G07260 Brachypodium distachyon BRADI1G07260 I
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I
Carubv10018748m.g Capsella rubella Carubv10018748m.g I
Carubv10027655m.g Capsella rubella Carubv10027655m.g I
cassava11642.m1 Manihot esculenta cassava11642.m1 I
cassava16944.m1 Manihot esculenta cassava16944.m1 I
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I
cassava25562.m1 Manihot esculenta cassava25562.m1 I
cassava26004.m1 Manihot esculenta cassava26004.m1 I
Ca_03266 Cicer arietinum Ca_03266 I
Ca_09203 Cicer arietinum Ca_09203 I
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I
Cla014272 Citrullus lanatus Cla014272 I
Cla018072 Citrullus lanatus Cla018072 I
Cla019089 Citrullus lanatus Cla019089 I
Cucsa.092250 Cucumis sativus Cucsa.092250 I
Cucsa.103470 Cucumis sativus Cucsa.103470 I
Cucsa.288590 Cucumis sativus Cucsa.288590 I
Cucsa.306690 Cucumis sativus Cucsa.306690 I
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I
GLYMA0041S00310 Glycine max GLYMA0041S00310 I
GLYMA01G00805 Glycine max GLYMA01G00805 I
GLYMA01G40411 Glycine max GLYMA01G40411 I
GLYMA04G05170 Glycine max GLYMA04G05170 I
GLYMA05G23080 Glycine max GLYMA05G23080 I
GLYMA05G36120 Glycine max GLYMA05G36120 I
GLYMA06G05260 Glycine max GLYMA06G05260 I
GLYMA07G15250 Glycine max GLYMA07G15250 I
GLYMA11G04880 Glycine max GLYMA11G04880 I
GLYMA13G01200 Glycine max GLYMA13G01200 I
GLYMA13G04920 Glycine max GLYMA13G04920 I
GLYMA14G10483 Glycine max GLYMA14G10483 I
GLYMA17G07330 Glycine max GLYMA17G07330 I
GLYMA17G16980 Glycine max GLYMA17G16980 I
GLYMA17G35020 Glycine max GLYMA17G35020 I
GLYMA19G02090 Glycine max GLYMA19G02090 I
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I
Gorai.010G079900 Gossypium raimondii Gorai.010G079900 I
GRMZM2G006352 Zea mays GRMZM2G006352 I
GSMUA_Achr4G01050_001 Musa acuminata GSMUA_Achr4G01050_001 I
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I
GSMUA_Achr6G30830_001 Musa acuminata GSMUA_Achr6G30830_001 I
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I
LPERR01G22970 Leersia perrieri LPERR01G22970 I
LPERR09G07880 Leersia perrieri LPERR09G07880 I
Lus10001316.g Linum usitatissimum Lus10001316.g I
Lus10006978.g Linum usitatissimum Lus10006978.g I
Lus10007248.g Linum usitatissimum Lus10007248.g I
Lus10028248.g Linum usitatissimum Lus10028248.g I
MDP0000124992 Malus domestica MDP0000124992 I
MDP0000262514 Malus domestica MDP0000262514 I
MDP0000322479 Malus domestica MDP0000322479 I
MDP0000785820 Malus domestica MDP0000785820 I
MDP0000786507 Malus domestica MDP0000786507 I
MDP0000809452 Malus domestica MDP0000809452 I
MDP0000836365 Malus domestica MDP0000836365 I
mgf002711m Mimulus guttatus mgf002711m I
mgf011646m Mimulus guttatus mgf011646m I
mgf020328m Mimulus guttatus mgf020328m I
mgf021409m Mimulus guttatus mgf021409m I
mgf024894m Mimulus guttatus mgf024894m I
MTR_1g017000 Medicago truncatula MTR_1g017000 I
MTR_1g017140 Medicago truncatula MTR_1g017140 I
MTR_3g103570 Medicago truncatula MTR_3g103570 I
MTR_4g097570 Medicago truncatula MTR_4g097570 I
MTR_4g128670 Medicago truncatula MTR_4g128670 I
O49746_ARATH Arabidopsis thaliana O49746_ARATH I
OB01G36020 Oryza brachyantha OB01G36020 I
OB05G32650 Oryza brachyantha OB05G32650 I
OMERI09G08730 Oryza meridionalis OMERI09G08730 I
OPUNC03G32690 Oryza punctata OPUNC03G32690 I
OPUNC09G09680 Oryza punctata OPUNC09G09680 I
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I
ORGLA09G0083700 Oryza glaberrima ORGLA09G0083700 I
ORUFI09G12010 Oryza rufipogon ORUFI09G12010 I
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I
Pavir.J34453 Panicum virgatum Pavir.J34453 I
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I
PK02305.1 Cannabis sativa PK02305.1 I
PK05741.1 Cannabis sativa PK05741.1 I
PK14382.1 Cannabis sativa PK14382.1 I
PK26008.1 Cannabis sativa PK26008.1 I
Pm002200 Prunus mume Pm002200 I
Pm008668 Prunus mume Pm008668 I
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I
PRUPE_ppa019554mg Prunus persica PRUPE_ppa019554mg I
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I
RAX3 Arabidopsis thaliana AT3G49690 D
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I
Si002350m.g Setaria italica Si002350m.g I
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I
Solyc12g008670.1 Solanum lycopersicum Solyc12g008670.1 I
TCM_037245 Theobroma cacao TCM_037245 I
TCM_038898 Theobroma cacao TCM_038898 I
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I