gw1.42.84.1 (Physcomitrella patens)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 gw1.42.84.1 T246561_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.839 0.839
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.839 0.839
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.793 0.793
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.793 0.793
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.793 0.793
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.759 0.759
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.759 0.759
LBD19
M06960_2.00 		Arabidopsis thaliana
CCKKAAAWHMMGSND
HNSCKKDWTTTMMGG		 Dap-seq
OMalley et al.(2016)
LBD19_col_a 		0.713 0.713
LBD19
M06961_2.00 		Arabidopsis thaliana
WWYCCGG
CCGGRWW		 Dap-seq
OMalley et al.(2016)
LBD19_colamp_a 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.42.84.1 LOB 5 92

Links

Other LOB family TFs
Other Physcomitrella patens TFs

320 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08282 Capronia coronata A1O1_08282 N
A1O3_03291 Capronia epimyces A1O3_03291 I
A1O5_00025 Cladophialophora psammophila A1O5_00025 N
A1O7_03671 Cladophialophora yegresii A1O7_03671 N
A1O9_03542 Exophiala aquamarina A1O9_03542 I
A1O9_13001 Exophiala aquamarina A1O9_13001 I
ACLA_079920 Aspergillus clavatus CADACLAG00007683 I
ACRE_088710 Acremonium chrysogenum ACRE_088710 I
AFUA_2G08040 Aspergillus fumigatus CADAFUAG00004446 I
ANIA_05849 Aspergillus nidulans CADANIAG00007192 I
BBA_08191 Beauveria bassiana BBA_08191 I
Bcin09g02560 Botrytis cinerea Bcin09g02560 I
BDDG_04796 Blastomyces dermatitidis BDDG_04796 I
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I
CADANGAG00007493 Aspergillus niger CADANGAG00007493 N
CADAORAG00005589 Aspergillus oryzae CADAORAG00005589 I
CHGG_00505 Chaetomium globosum CHGG_00505 I
CIMG_00917 Coccidioides immitis CIMG_00917 N
Cob_02185 Colletotrichum orbiculare Cob_02185 I
CPC735_054240 Coccidioides posadasii CPC735_054240 N
CPUR_01702 Claviceps purpurea CPUR_01702 I
DRE_04286 Drechslerella stenobrocha DRE_04286 I
estExt_fgenesh1_pg.C_70327 Cryphonectria parasitica estExt_fgenesh1_pg.C_70327 I
estExt_fgenesh3_pm.C_140174 Neurospora discreta estExt_fgenesh3_pm.C_140174 I
EURHEDRAFT_513914 Aspergillus ruber EURHEDRAFT_513914 I
EV44_g6283 Erysiphe necator EV44_g6283 I
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I
FGRRES_17309 Fusarium graminearum FGRRES_17309 I
FOXG_05408 Fusarium oxysporum FOXG_05408 I
FOXG_14277 Fusarium oxysporum FOXG_14277 I
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I
FVEG_02723 Fusarium verticillioides FVEG_02723 I
G647_04707 Cladophialophora carrionii G647_04707 N
GSTUM_00005598001 Tuber melanosporum GSTUM_00005598001 I
H072_8333 Dactylellina haptotyla H072_8333 I
H101_07435 Trichophyton interdigitale H101_07435 I
HCBG_04625 Histoplasma capsulatum HCBG_04625 I
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N
MAC_03900 Metarhizium acridum MAC_03900 I
MAJ_05180 Metarhizium majus MAJ_05180 I
MAM_05041 Metarhizium album MAM_05041 I
MBM_05016 Marssonina brunnea MBM_05016 I
MBR_04335 Metarhizium brunneum MBR_04335 I
MCYG_00297 Arthroderma otae MCYG_00297 I
MCYG_00297 Microsporum canis MCYG_00297 I
MGG_09263 Magnaporthe oryzae MGG_09263 I
MGU_05623 Metarhizium guizhouense MGU_05623 I
NCU04663 Neurospora crassa NCU04663 D
NechaG40581 Fusarium solani NechaG40581 I
NFIA_024310 Neosartorya fischeri CADNFIAG00002261 I
NFIA_083690 Neosartorya fischeri CADNFIAG00006940 I
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I
PAAG_08490 Paracoccidioides sp lutzii PAAG_08490 I
PABG_04642 Paracoccidioides brasiliensis PABG_04642 I
Pc22g26430 Penicillium chrysogenum Pc22g26430 N
Pc24g00780 Penicillium chrysogenum Pc24g00780 N
Pc24g01310 Penicillium chrysogenum Pc24g01310 N
PCH_Pc22g26430 Penicillium rubens PCH_Pc22g26430 N
PCH_Pc24g00780 Penicillium rubens PCH_Pc24g00780 N
PCH_Pc24g01310 Penicillium rubens PCH_Pc24g01310 N
PDE_04102 Penicillium oxalicum PDE_04102 I
PDIP_85460 Penicillium digitatum PDIP_85460 I
PEX1_083360 Penicillium expansum PEX1_083360 I
PFICI_07122 Pestalotiopsis fici PFICI_07122 I
PITC_041810 Penicillium italicum PITC_041810 I
PMAA_070340 Penicillium marneffei PMAA_070340 I
PMAA_070340 Talaromyces marneffei PMAA_070340 I
PV04_03866 Capronia semiimmersa PV04_03866 N
PV06_00266 Exophiala oligosperma PV06_00266 N
PV07_06437 Cladophialophora immunda PV07_06437 I
PV08_04106 Exophiala spinifera PV08_04106 N
PV10_05308 Exophiala mesophila PV10_05308 N
PV11_00815 Exophiala sideris PV11_00815 N
PVAR5_8925 Byssochlamys spectabilis PVAR5_8925 I
S40288_07421 Stachybotrys chartarum S40288_07421 I
SBOR_3621 Sclerotinia borealis SBOR_3621 I
SMAC_08342 Sordaria macrospora SMAC_08342 I
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I
TEQG_02692 Trichophyton equinum TEQG_02692 I
TESG_02247 Trichophyton tonsurans TESG_02247 I
THITE_40970 Thielavia terrestris THITE_40970 I
TRIATDRAFT_161814 Trichoderma atroviride TRIATDRAFT_161814 I
TRIREDRAFT_49372 Trichoderma reesei TRIREDRAFT_49372 I
TRIVIDRAFT_122714 Trichoderma virens TRIVIDRAFT_122714 I
TSTA_090670 Talaromyces stipitatus TSTA_090670 I
U727_0043004001 Penicillium solitum U727_0043004001 I
UREG_00865 Uncinocarpus reesii UREG_00865 N
UV8b_4097 Ustilaginoidea virens UV8b_4097 I
VHEMI00437 Torrubiella hemipterigena VHEMI00437 I
Z517_10110 Fonsecaea pedrosoi Z517_10110 N
Z519_00024 Cladophialophora bantiana Z519_00024 N