CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G291500
(
Gossypium raimondii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Gorai.011G291500
T246999_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G291500.1
LOB
11
109
SCAACKLLKRRCSPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLVYEAEARLRDPVYGCIGAIALLQRKMIELQHDLALARA
Gorai.011G291500.2
LOB
11
109
SCAACKLLKRRCSPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLVYEAEARLRDPVYGCIGAIALLQRKMIELQHDLALARA
Links
Other
LOB
family TFs
Other
Gossypium raimondii
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP15315
Atta cephalotes
ACEP15315
N
ADIR004612
Anopheles dirus
ADIR004612
N
AEPI000661
Anopheles epiroticus
AEPI000661
N
ASIS006297
Anopheles sinensis
ASIS006297
N
DILT_0001312701
Diphyllobothrium latum
DILT_0001312701
N
ECPE_0000273401
Echinostoma caproni
ECPE_0000273401
N
ENSPCAG00000014663
Procavia capensis
ENSPCAG00000014663
N
fgenesh1_kg.C_scaffold_16000108
Phytophthora capsici
fgenesh1_kg.C_scaffold_16000108
N
GK18638
Drosophila willistoni
FBgn0220636
N
GK24890
Drosophila willistoni
FBgn0226849
N
LOAG_09072
Loa loa
LOAG_09072
N
MDOA004921
Musca domestica
MDOA004921
N
nOo.2.0.1.g06577
Onchocerca ochengi
nOo.2.0.1.g06577
N
pax6.L
Xenopus laevis
XB-GENE-865046
I
PEQ_0000587201
Parascaris equorum
PEQ_0000587201
N
PXEA_0001865101
Protopolystoma xenopodis
PXEA_0001865101
N
PXEA_0002437401
Protopolystoma xenopodis
PXEA_0002437401
N
Sjc_0082940
Schistosoma japonicum
Sjc_0082940
N
SMU15026520
Schmidtea mediterranea
SMU15026520
N
SPER_0000032601
Spirometra erinaceieuropaei
SPER_0000032601
N
SPER_0001686401
Spirometra erinaceieuropaei
SPER_0001686401
N
SPER_0003607601
Spirometra erinaceieuropaei
SPER_0003607601
N
SSLN_0001114201
Schistocephalus solidus
SSLN_0001114201
N