CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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naif1
(
Oryzias latipes
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
ENSORLG00000018283
T248378_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN
NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
0.913
0.545
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN
NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.911
0.519
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN
NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.877
0.429
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000022896
MADF
25
107
VEEIEKQKHTLVNHFNAGVTHMAKNNAWVDILRKVNAVTTCPRELPEVKKKWSDMKTEVRRKVAQARAAIEGTSADCATVPVI
ENSORLP00000022898
MADF
21
103
VEEIEKQKHTLVNHFNAGVTHMAKNNAWVDILRKVNAVTTCPRELPEVKKKWSDMKTEVRRKVAQARAAIEGTSADCATVPVI
Links
Other
MADF
family TFs
Other
Oryzias latipes
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy