Pavir.J27535 (Panicum virgatum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pavir.J27535 T250829_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27535.1.p MADF 55 124

Links

Other MADF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001100 Ricinus communis 29646.m001100 I 0.000
29646.m001101 Ricinus communis 29646.m001101 I 0.000
30192.m000545 Ricinus communis 30192.m000545 I 0.000
AMTR_s00007p00041830 Amborella trichopoda AMTR_s00007p00041830 I 0.000
AMTR_s00021p00158020 Amborella trichopoda AMTR_s00021p00158020 I 0.000
AMTR_s00119p00135380 Amborella trichopoda AMTR_s00119p00135380 I 0.000
Aquca_005_00099 Aquilegia coerulea Aquca_005_00099 I 0.000
Bo1g129830 Brassica oleracea Bo1g129830 I 0.000
Bo4g053680 Brassica oleracea Bo4g053680 I 0.000
Bo5g127500 Brassica oleracea Bo5g127500 I 0.000
Bostr.0124s0115 Boechera stricta Bostr.0124s0115 I 0.000
Bostr.24513s0122 Boechera stricta Bostr.24513s0122 I 0.000
Bostr.28625s0206 Boechera stricta Bostr.28625s0206 I 0.000
Bra018280 Brassica rapa Bra018280 I 0.000
Bra027284 Brassica rapa Bra027284 I 0.000
Bra030952 Brassica rapa Bra030952 I 0.000
BRADI2G50190 Brachypodium distachyon BRADI2G50190 I 0.000
Cagra.0007s0045 Capsella grandiflora Cagra.0007s0045 I 0.000
Cagra.1472s0007 Capsella grandiflora Cagra.1472s0007 I 0.000
Cagra.2527s0006 Capsella grandiflora Cagra.2527s0006 I 0.000
Carubv10009348m.g Capsella rubella Carubv10009348m.g I 0.000
Carubv10023502m.g Capsella rubella Carubv10023502m.g I 0.000
cassava19177.valid.m1 Manihot esculenta cassava19177.valid.m1 I 0.000
cassava35669.valid.m1 Manihot esculenta cassava35669.valid.m1 I 0.000
cassava35945.valid.m1 Manihot esculenta cassava35945.valid.m1 I 0.000
Ca_02473 Cicer arietinum Ca_02473 I 0.000
Ca_11295 Cicer arietinum Ca_11295 I 0.000
Ca_12866 Cicer arietinum Ca_12866 I 0.000
Ca_16227 Cicer arietinum Ca_16227 I 0.000
Ciclev10008390m.g Citrus clementina Ciclev10008390m.g I 0.000
Ciclev10015871m.g Citrus clementina Ciclev10015871m.g I 0.000
Cla002460 Citrullus lanatus Cla002460 I 0.000
Cla016530 Citrullus lanatus Cla016530 I 0.000
Cla023702 Citrullus lanatus Cla023702 I 0.000
Cucsa.122730 Cucumis sativus Cucsa.122730 I 0.000
Cucsa.273460 Cucumis sativus Cucsa.273460 I 0.000
Eucgr.K01089 Eucalyptus grandis Eucgr.K01089 I 0.000
evm.TU.supercontig_131.71 Carica papaya evm.TU.supercontig_131.71 I 0.000
evm.TU.supercontig_209.13 Carica papaya evm.TU.supercontig_209.13 I 0.000
F775_07590 Aegilops tauschii F775_07590 I 0.000
gene17805-v1.0-hybrid Fragaria vesca gene17805-v1.0-hybrid I 0.000
gene27171-v1.0-hybrid Fragaria vesca gene27171-v1.0-hybrid I 0.000
GLYMA06G34330 Glycine max GLYMA06G34330 I 0.000
GLYMA06G43721 Glycine max GLYMA06G43721 I 0.000
GLYMA12G14200 Glycine max GLYMA12G14200 I 0.000
GLYMA12G20160 Glycine max GLYMA12G20160 I 0.000
GLYMA12G33640 Glycine max GLYMA12G33640 I 0.000
GLYMA12G35720 Glycine max GLYMA12G35720 I 0.000
GLYMA13G34690 Glycine max GLYMA13G34690 I 0.000
GLYMA13G36840 Glycine max GLYMA13G36840 I 0.000
Gorai.002G064500 Gossypium raimondii Gorai.002G064500 I 0.000
Gorai.009G373000 Gossypium raimondii Gorai.009G373000 I 0.000
Gorai.013G172800 Gossypium raimondii Gorai.013G172800 I 0.000
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.000
GSMUA_Achr3G03540_001 Musa acuminata GSMUA_Achr3G03540_001 I 0.000
GSMUA_Achr3G31370_001 Musa acuminata GSMUA_Achr3G31370_001 I 0.000
GSMUA_Achr5G06660_001 Musa acuminata GSMUA_Achr5G06660_001 I 0.000
GSMUA_Achr7G25320_001 Musa acuminata GSMUA_Achr7G25320_001 I 0.000
GSMUA_Achr8G19990_001 Musa acuminata GSMUA_Achr8G19990_001 I 0.000
Lus10000463.g Linum usitatissimum Lus10000463.g I 0.000
MDP0000182310 Malus domestica MDP0000182310 I 0.000
MDP0000184743 Malus domestica MDP0000184743 I 0.000
MDP0000189749 Malus domestica MDP0000189749 I 0.000
MDP0000243495 Malus domestica MDP0000243495 I 0.000
MDP0000259723 Malus domestica MDP0000259723 I 0.000
MDP0000442611 Malus domestica MDP0000442611 I 0.000
mgf002386m Mimulus guttatus mgf002386m I 0.000
MLOC_12004 Hordeum vulgare MLOC_12004 I 0.000
MTR_2g078200 Medicago truncatula MTR_2g078200 I 0.000
MTR_2g090960 Medicago truncatula MTR_2g090960 I 0.000
MTR_4g079580 Medicago truncatula MTR_4g079580 I 0.000
orange1.1g014360m.g Citrus sinensis orange1.1g014360m.g I 0.000
orange1.1g019898m.g Citrus sinensis orange1.1g019898m.g I 0.000
PGSC0003DMG400009406 Solanum tuberosum PGSC0003DMG400009406 I 0.000
PGSC0003DMG400012396 Solanum tuberosum PGSC0003DMG400012396 I 0.000
PGSC0003DMG400015377 Solanum tuberosum PGSC0003DMG400015377 I 0.000
PGSC0003DMG400022964 Solanum tuberosum PGSC0003DMG400022964 I 0.000
PK04257.1 Cannabis sativa PK04257.1 I 0.000
PK12847.1 Cannabis sativa PK12847.1 I 0.000
Pm010118 Prunus mume Pm010118 I 0.000
Pm011369 Prunus mume Pm011369 I 0.000
Pm029788 Prunus mume Pm029788 I 0.000
POPTR_0011s09890 Populus trichocarpa POPTR_0011s09890 I 0.000
POPTR_0013s12370 Populus trichocarpa POPTR_0013s12370 I 0.000
POPTR_0019s12110 Populus trichocarpa POPTR_0019s12110 I 0.000
PRUPE_ppa004661mg Prunus persica PRUPE_ppa004661mg I 0.000
PRUPE_ppa007094mg Prunus persica PRUPE_ppa007094mg I 0.000
PRUPE_ppb024383mg Prunus persica PRUPE_ppb024383mg I 0.000
SapurV1A.0083s0520 Salix purpurea SapurV1A.0083s0520 I 0.000
SapurV1A.0303s0040 Salix purpurea SapurV1A.0303s0040 I 0.000
SapurV1A.1073s0050 Salix purpurea SapurV1A.1073s0050 I 0.000
SapurV1A.2882s0020 Salix purpurea SapurV1A.2882s0020 I 0.000
SapurV1A.5793s0010 Salix purpurea SapurV1A.5793s0010 I 0.000
Solyc02g077250.2 Solanum lycopersicum Solyc02g077250.2 I 0.000
Solyc05g012840.1 Solanum lycopersicum Solyc05g012840.1 I 0.000
Solyc07g053410.2 Solanum lycopersicum Solyc07g053410.2 I 0.000
Solyc07g062680.1 Solanum lycopersicum Solyc07g062680.1 I 0.000
Solyc10g018710.1 Solanum lycopersicum Solyc10g018710.1 I 0.000
Solyc11g045640.1 Solanum lycopersicum Solyc11g045640.1 I 0.000
Solyc12g014140.1 Solanum lycopersicum Solyc12g014140.1 I 0.000
TCM_003652 Theobroma cacao TCM_003652 I 0.000
TCM_031706 Theobroma cacao TCM_031706 I 0.000
TCP10 Arabidopsis thaliana AT2G31070 I 0.000
TCP10 Arabidopsis lyrata scaffold_401627.1 I 0.000
TCP10 Vitis vinifera VIT_12s0028g02520 I 0.000
Thhalv10011534m.g Eutrema salsugineum Thhalv10011534m.g I 0.000
Thhalv10016870m.g Eutrema salsugineum Thhalv10016870m.g I 0.000
VIT_10s0003g00870 Vitis vinifera VIT_10s0003g00870 I 0.000
VIT_19s0014g01680 Vitis vinifera VIT_19s0014g01680 I 0.000
XM_002300382.1 Populus trichocarpa POPTR_0001s38480 I 0.000