CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK20477.1
(
Cannabis sativa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
PK20477.1
T251174_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK20477.1
MADF
1
60
RQKDWKEVAEAVNGRDNGVKAYKTDVQCKNRVDTLKKKYKLEKSKPLPSAWVFYPRLDFL
Links
Other
MADF
family TFs
Other
Cannabis sativa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29814.m000741
Ricinus communis
29814.m000741
I
0.850
Ciclev10033792m.g
Citrus clementina
Ciclev10033792m.g
I
0.857
evm.TU.supercontig_19.152
Carica papaya
evm.TU.supercontig_19.152
I
0.839
gene21007-v1.0-hybrid
Fragaria vesca
gene21007-v1.0-hybrid
N
0.855
GSMUA_Achr9G04510_001
Musa acuminata
GSMUA_Achr9G04510_001
I
0.834
MDP0000097759
Malus domestica
MDP0000097759
N
0.856
MDP0000943251
Malus domestica
MDP0000943251
N
0.826
orange1.1g024563m.g
Citrus sinensis
orange1.1g024563m.g
I
0.857
PGSC0003DMG400030023
Solanum tuberosum
PGSC0003DMG400030023
I
0.863
POPTR_0008s07140
Populus trichocarpa
POPTR_0008s07140
I
0.851
PRUPE_ppa010427mg
Prunus persica
PRUPE_ppa010427mg
I
0.874
SapurV1A.0650s0110
Salix purpurea
SapurV1A.0650s0110
I
0.851
Solyc06g051120.2
Solanum lycopersicum
Solyc06g051120.2
I
0.863
TCM_042467
Theobroma cacao
TCM_042467
N
0.859
VIT_08s0058g00200
Vitis vinifera
VIT_08s0058g00200
I
0.882