MAF4 (Arabidopsis lyrata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Al_scaffold_0008_3055 T252791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FLC
M06990_2.00 		Arabidopsis thaliana
WWDMYNDWWWWGGAAASW
WSTTTCCWWWWHNRKHWW		 Dap-seq
OMalley et al.(2016)
AGL25_col_a 		0.792 0.792
FLC
M06991_2.00 		Arabidopsis thaliana
WCYHAAAAWGGAAAS
STTTCCWTTTTDRGW		 Dap-seq
OMalley et al.(2016)
AGL25_colamp_a 		0.792 0.792
FLC
M08147_2.00 		Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH
DDBTTTCYWWTTTBRGHWWNN		 ChIP-seq
Mathelier et al.(2014)
MA0558.1 		0.792 0.792
AGL27
M08145_2.00 		Arabidopsis thaliana
MCMAAAATRGAAAB
VTTTCYATTTTKGK		 ChIP-seq
Mathelier et al.(2014)
MA1012.1 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0008_3055 MADS box 10 57

Links

Other MADS box family TFs
Other Arabidopsis lyrata TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00170 Capronia coronata A1O1_00170 I 0.000
A1O1_07971 Capronia coronata A1O1_07971 I 0.000
A1O3_02036 Capronia epimyces A1O3_02036 I 0.000
A1O3_06089 Capronia epimyces A1O3_06089 I 0.000
A1O5_04108 Cladophialophora psammophila A1O5_04108 I 0.000
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.000
A1O7_00275 Cladophialophora yegresii A1O7_00275 I 0.000
A1O7_09629 Cladophialophora yegresii A1O7_09629 I 0.000
A1O9_08621 Exophiala aquamarina A1O9_08621 I 0.000
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.000
AB07238.1 Alternaria brassicicola AB07238.1 I 0.000
ACLA_049990 Aspergillus clavatus CADACLAG00004890 I 0.000
ACRE_043870 Acremonium chrysogenum ACRE_043870 N 0.000
AFUA_3G06170 Aspergillus fumigatus CADAFUAG00005478 I 0.000
AFUA_4G10820 Aspergillus fumigatus CADAFUAG00008327 I 0.000
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.000
AMAG_06979 Allomyces macrogynus AMAG_06979 I 0.000
ANIA_01962 Aspergillus nidulans CADANIAG00008622 I 0.000
ANIA_03667 Aspergillus nidulans CADANIAG00005066 I 0.000
ATEG_03127 Aspergillus terreus CADATEAG00008305 I 0.000
ATEG_03987 Aspergillus terreus CADATEAG00009198 I 0.000
AUEXF2481DRAFT_37338 Aureobasidium subglaciale AUEXF2481DRAFT_37338 I 0.000
BATDEDRAFT_7482 Batrachochytrium dendrobatidis BATDEDRAFT_7482 I 0.000
BAUCODRAFT_72427 Baudoinia compniacensis BAUCODRAFT_72427 I 0.000
BBA_05443 Beauveria bassiana BBA_05443 I 0.000
Bcin09g02870 Botrytis cinerea Bcin09g02870 I 0.000
BDDG_02246 Blastomyces dermatitidis BDDG_02246 I 0.000
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I 0.000
BN7_1833 Wickerhamomyces ciferrii BN7_1833 I 0.000
BOTBODRAFT_190207 Botryobasidium botryosum BOTBODRAFT_190207 I 0.000
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N 0.000
CADAFLAG00002060 Aspergillus flavus CADAFLAG00002060 I 0.000
CADAFLAG00011022 Aspergillus flavus CADAFLAG00011022 I 0.000
CADANGAG00004297 Aspergillus niger CADANGAG00004297 I 0.000
CADAORAG00001679 Aspergillus oryzae CADAORAG00001679 N 0.000
CADAORAG00003902 Aspergillus oryzae CADAORAG00003902 I 0.000
CAGL0D05434g Candida glabrata CAGL0D05434g I 0.000
CANTEDRAFT_136140 Candida tenuis CANTEDRAFT_136140 I 0.000
CC1G_07392 Coprinopsis cinerea CC1G_07392 N 0.000
CCM_04586 Cordyceps militaris CCM_04586 I 0.000
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.000
CGGC5_2884 Colletotrichum gloeosporioides CGGC5_2884 I 0.000
CH063_08155 Colletotrichum higginsianum CH063_08155 I 0.000
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.000
CHGG_03580 Chaetomium globosum CHGG_03580 N 0.000
CHGG_03639 Chaetomium globosum CHGG_03639 N 0.000
CHGG_08188 Chaetomium globosum CHGG_08188 I 0.000
CIMG_00406 Coccidioides immitis CIMG_00406 I 0.000
CIMG_12783 Coccidioides immitis CIMG_12783 I 0.000
CMQ_1586 Grosmannia clavigera CMQ_1586 I 0.000
CMQ_5376 Grosmannia clavigera CMQ_5376 I 0.000
Cob_03892 Colletotrichum orbiculare Cob_03892 I 0.000
Cob_13096 Colletotrichum orbiculare Cob_13096 N 0.000
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I 0.000
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I 0.000
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I 0.000
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I 0.000
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I 0.000
CPC735_049570 Coccidioides posadasii CPC735_049570 I 0.000
CPC735_058040 Coccidioides posadasii CPC735_058040 I 0.000
CPUR_06949 Claviceps purpurea CPUR_06949 I 0.000
csin105999 Clonorchis sinensis csin105999 I 0.000
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I 0.000
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N 0.000
CTHT_0006830 Chaetomium thermophilum CTHT_0006830 I 0.000
CTHT_0010110 Chaetomium thermophilum CTHT_0010110 I 0.000
DOTSEDRAFT_192196 Dothistroma septosporum DOTSEDRAFT_192196 I 0.000
DOTSEDRAFT_67720 Dothistroma septosporum DOTSEDRAFT_67720 I 0.000
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.000
EPUS_03386 Endocarpon pusillum EPUS_03386 I 0.000
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.000
estExt_fgenesh1_pg.C_10913 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10913 I 0.000
estExt_fgenesh1_pg.C_20723 Cryphonectria parasitica estExt_fgenesh1_pg.C_20723 I 0.000
EURHEDRAFT_373724 Aspergillus ruber EURHEDRAFT_373724 I 0.000
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I 0.000
e_gw1.5.360.1 Cryphonectria parasitica e_gw1.5.360.1 I 0.000
F503_03625 Ophiostoma piceae uamh F503_03625 I 0.000
F503_06490 Ophiostoma piceae uamh F503_06490 I 0.000
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I 0.000
FFUJ_13386 Fusarium fujikuroi FFUJ_13386 I 0.000
fgenesh1_pm.00609_#_235 Aspergillus carbonarius fgenesh1_pm.00609_#_235 I 0.000
fgeneshN1_pm.sca_3_chr4_2_0000013 Nectria haematococca fgeneshN1_pm.sca_3_chr4_2_0000013 I 0.000
FGRRES_05151 Fusarium graminearum FGRRES_05151 I 0.000
FGRRES_08893 Fusarium graminearum FGRRES_08893 I 0.000
FOXG_07900 Fusarium oxysporum FOXG_07900 I 0.000
FPSE_06551 Fusarium pseudograminearum FPSE_06551 I 0.000
FVEG_04822 Fusarium verticillioides FVEG_04822 I 0.000
G647_00298 Cladophialophora carrionii G647_00298 I 0.000
G647_10298 Cladophialophora carrionii G647_10298 I 0.000
GALMADRAFT_224334 Galerina marginata GALMADRAFT_224334 I 0.000
GB51010 Apis mellifera GB51010 I 0.000
genemark-nMf.1.1.scaf07188-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf07188-processed-gene-0.1 I 0.000
GGTG_04596 Gaeumannomyces graminis GGTG_04596 I 0.000
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I 0.000
GLOINDRAFT_204670 Rhizophagus irregularis GLOINDRAFT_204670 I 0.000
GLOINDRAFT_25061 Rhizophagus irregularis GLOINDRAFT_25061 I 0.000
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I 0.000
GLOINDRAFT_44333 Rhizophagus irregularis GLOINDRAFT_44333 I 0.000
GLOINDRAFT_47422 Rhizophagus irregularis GLOINDRAFT_47422 I 0.000
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I 0.000
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I 0.000
GLOINDRAFT_75094 Rhizophagus irregularis GLOINDRAFT_75094 I 0.000
GLOINDRAFT_75362 Rhizophagus irregularis GLOINDRAFT_75362 I 0.000
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I 0.000
GLRG_04643 Colletotrichum graminicola GLRG_04643 I 0.000
GLRG_08663 Colletotrichum graminicola GLRG_08663 I 0.000
GMDG_03362 Pseudogymnoascus destructans GMDG_03362 I 0.000
GSTUM_00001090001 Tuber melanosporum GSTUM_00001090001 I 0.000
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I 0.000
H072_9576 Dactylellina haptotyla H072_9576 I 0.000
H101_00568 Trichophyton interdigitale H101_00568 I 0.000
H101_01550 Trichophyton interdigitale H101_01550 I 0.000
HCBG_03464 Histoplasma capsulatum HCBG_03464 I 0.000
HCBG_03514 Histoplasma capsulatum HCBG_03514 I 0.000
HCBG_05263 Histoplasma capsulatum HCBG_05263 I 0.000
HDID_0000757301 Hymenolepis diminuta HDID_0000757301 I 0.000
HmN_000097600 Hymenolepis microstoma HmN_000097600 I 0.000
HMPREF1120_05727 Exophiala dermatitidis HMPREF1120_05727 I 0.000
HMPREF1120_08862 Exophiala dermatitidis HMPREF1120_08862 I 0.000
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I 0.000
HNAJ_0000734901 Hymenolepis nana HNAJ_0000734901 I 0.000
JAAARDRAFT_113690 Jaapia argillacea JAAARDRAFT_113690 I 0.000
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I 0.000
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I 0.000
Kwal_21061 Kluyveromyces waltii Kwal_21061 I 0.000
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I 0.000
M404DRAFT_56218 Pisolithus tinctorius M404DRAFT_56218 I 0.000
M408DRAFT_20648 Serendipita vermifera M408DRAFT_20648 N 0.000
M437DRAFT_74676 Aureobasidium melanogenum M437DRAFT_74676 I 0.000
M438DRAFT_346080 Aureobasidium pullulans M438DRAFT_346080 I 0.000
MAC_05350 Metarhizium acridum MAC_05350 I 0.000
MAC_07229 Metarhizium acridum MAC_07229 I 0.000
MAJ_07256 Metarhizium majus MAJ_07256 I 0.000
MAJ_11317 Metarhizium majus MAJ_11317 I 0.000
MAM_00948 Metarhizium album MAM_00948 N 0.000
MAM_01740 Metarhizium album MAM_01740 I 0.000
MANI_017634 Metarhizium anisopliae MANI_017634 I 0.000
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.000
MAT2 Aspergillus nidulans CADANIAG00005695 I 0.000
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.000
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.000
MBM_09015 Marssonina brunnea MBM_09015 I 0.000
MBR_05099 Metarhizium brunneum MBR_05099 I 0.000
MBR_08193 Metarhizium brunneum MBR_08193 I 0.000
MCYG_06419 Microsporum canis MCYG_06419 I 0.000
MCYG_06419 Arthroderma otae MCYG_06419 I 0.000
MGG_02978 Magnaporthe oryzae MGG_02978 I 0.000
MGG_03959 Magnaporthe oryzae MGG_03959 I 0.000
MGG_05641 Magnaporthe oryzae MGG_05641 I 0.000
MGU_01572 Metarhizium guizhouense MGU_01572 I 0.000
MGYG_06874 Microsporum gypseum MGYG_06874 I 0.000
MhA1_Contig651.frz3.gene5 Meloidogyne hapla MhA1_Contig651.frz3.gene5 I 0.000
MVLG_01557 Microbotryum violaceum MVLG_01557 I 0.000
MVLG_04343 Microbotryum violaceum MVLG_04343 N 0.000
MYCFIDRAFT_86029 Pseudocercospora fijiensis MYCFIDRAFT_86029 I 0.000
NCU03481 Neurospora crassa NCU03481 I 0.000
NechaG106035 Fusarium solani NechaG106035 I 0.000
NEMVEDRAFT_v1g97222 Nematostella vectensis NEMVEDRAFT_v1g97222 I 0.000
NEUTE1DRAFT_103050 Neurospora tetrasperma NEUTE1DRAFT_103050 I 0.000
NEUTE1DRAFT_123419 Neurospora tetrasperma NEUTE1DRAFT_123419 I 0.000
NFIA_024390 Neosartorya fischeri CADNFIAG00002255 I 0.000
NFIA_105270 Neosartorya fischeri CADNFIAG00010303 I 0.000
nRc.2.0.1.g22623 Romanomermis culicivorax nRc.2.0.1.g22623 I 0.000
NV14822 Nasonia vitripennis NV14822 I 0.000
Ocbimv22024932m.g Octopus bimaculoides Ocbimv22024932m.g I 0.000
OCS_00196 Ophiocordyceps sinensis OCS_00196 I 0.000
OCS_05413 Ophiocordyceps sinensis OCS_05413 I 0.000
OCS_06292 Ophiocordyceps sinensis OCS_06292 I 0.000
OIDMADRAFT_143853 Oidiodendron maius OIDMADRAFT_143853 I 0.000
PAAG_02636 Paracoccidioides sp lutzii PAAG_02636 I 0.000
PABG_03121 Paracoccidioides brasiliensis PABG_03121 I 0.000
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I 0.000
PaG_02426 Pseudozyma aphidis PaG_02426 N 0.000
Pc22g06930 Penicillium chrysogenum Pc22g06930 I 0.000
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I 0.000
PDE_01613 Penicillium oxalicum PDE_01613 I 0.000
PDE_06698 Penicillium oxalicum PDE_06698 I 0.000
PDE_08506 Penicillium oxalicum PDE_08506 I 0.000
PFICI_11445 Pestalotiopsis fici PFICI_11445 I 0.000
PHACADRAFT_188459 Phanerochaete carnosa PHACADRAFT_188459 I 0.000
PHSY_004115 Pseudozyma hubeiensis PHSY_004115 I 0.000
PIIN_01319 Piriformospora indica PIIN_01319 N 0.000
PIIN_06327 Piriformospora indica PIIN_06327 I 0.000
PITC_063570 Penicillium italicum PITC_063570 I 0.000
PITC_068990 Penicillium italicum PITC_068990 I 0.000
PMAA_003200 Talaromyces marneffei PMAA_003200 I 0.000
PMAA_003200 Penicillium marneffei PMAA_003200 I 0.000
PMAA_040750 Talaromyces marneffei PMAA_040750 I 0.000
PMAA_040750 Penicillium marneffei PMAA_040750 I 0.000
PNEG_02275 Pneumocystis murina PNEG_02275 I 0.000
PODANS_1_20590 Podospora anserina PODANS_1_20590 I 0.000
PredSwiss_CON647.2 Pneumocystis carinii PredSwiss_CON647.2 I 0.000
PredSwiss_EST753.1 Pneumocystis carinii PredSwiss_EST753.1 I 0.000
PTRG_06171 Pyrenophora triticirepentis PTRG_06171 I 0.000
PTT_07342 Pyrenophora teres PTT_07342 I 0.000
PV04_01817 Capronia semiimmersa PV04_01817 I 0.000
PV06_08316 Exophiala oligosperma PV06_08316 I 0.000
PV07_10630 Cladophialophora immunda PV07_10630 I 0.000
PV08_07043 Exophiala spinifera PV08_07043 I 0.000
PV09_07372 Verruconis gallopava PV09_07372 I 0.000
PV10_01892 Exophiala mesophila PV10_01892 I 0.000
PVAR5_3110 Byssochlamys spectabilis PVAR5_3110 I 0.000
S40285_03081 Stachybotrys chlorohalonata S40285_03081 I 0.000
S40288_01674 Stachybotrys chartarum S40288_01674 I 0.000
S40288_01998 Stachybotrys chartarum S40288_01998 I 0.000
SAPIO_CDS2868 Scedosporium apiospermum SAPIO_CDS2868 I 0.000
SBOR_3594 Sclerotinia borealis SBOR_3594 I 0.000
SBOR_9074 Sclerotinia borealis SBOR_9074 I 0.000
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I 0.000
SCHCODRAFT_255090 Schizophyllum commune SCHCODRAFT_255090 N 0.000
SEPMUDRAFT_153151 Sphaerulina musiva SEPMUDRAFT_153151 I 0.000
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I 0.000
SJAG_04009 Schizosaccharomyces japonicus SJAG_04009 I 0.000
SJAG_05153 Schizosaccharomyces japonicus SJAG_05153 I 0.000
SMAC_05404 Sordaria macrospora SMAC_05404 I 0.000
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.000
SMUV_0000691501 Syphacia muris SMUV_0000691501 I 0.000
SMUV_0000981301 Syphacia muris SMUV_0000981301 I 0.000
SNOG_07773 Stagonospora nodorum SNOG_07773 I 0.000
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I 0.000
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I 0.000
SPBR_09078 Sporothrix brasiliensis SPBR_09078 I 0.000
SPPG_01923 Spizellomyces punctatus SPPG_01923 I 0.000
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I 0.000
T265_06704 Opisthorchis viverrini T265_06704 I 0.000
TDEL_0C04960 Torulaspora delbrueckii TDEL_0C04960 I 0.000
TEQG_04869 Trichophyton equinum TEQG_04869 I 0.000
TESG_05246 Trichophyton tonsurans TESG_05246 I 0.000
TRIATDRAFT_33998 Trichoderma atroviride TRIATDRAFT_33998 I 0.000
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I 0.000
TRIVIDRAFT_19877 Trichoderma virens TRIVIDRAFT_19877 N 0.000
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.000
TSTA_077960 Talaromyces stipitatus TSTA_077960 I 0.000
TVAG_010230 Trichomonas vaginalis TVAG_010230 I 0.000
TVAG_142450 Trichomonas vaginalis TVAG_142450 I 0.000
TVAG_180150 Trichomonas vaginalis TVAG_180150 I 0.000
TVAG_201900 Trichomonas vaginalis TVAG_201900 I 0.000
TVAG_280760 Trichomonas vaginalis TVAG_280760 I 0.000
U727_00429890111 Penicillium solitum U727_00429890111 I 0.000
U727_00431010161 Penicillium solitum U727_00431010161 I 0.000
UCREL1_2891 Eutypa lata UCREL1_2891 N 0.000
UCREL1_7053 Eutypa lata UCREL1_7053 I 0.000
UCRNP2_5172 Neofusicoccum parvum UCRNP2_5172 I 0.000
UREG_05111 Uncinocarpus reesii UREG_05111 I 0.000
UV8b_1585 Ustilaginoidea virens UV8b_1585 I 0.000
UV8b_664 Ustilaginoidea virens UV8b_664 I 0.000
V499_06181 Pseudogymnoascus pannorum V499_06181 I 0.000
V565_068660 Rhizoctonia solani V565_068660 I 0.000
VDAG_02444 Verticillium dahliae VDAG_02444 I 0.000
VDAG_07007 Verticillium dahliae VDAG_07007 I 0.000
VHEMI05549 Torrubiella hemipterigena VHEMI05549 I 0.000
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I 0.000
X797_008883 Metarhizium robertsii X797_008883 I 0.000
XP_002163303.1 Hydra magnipapillata XP_002163303.1 I 0.000
YALI0_B02266g Yarrowia lipolytica YALI0_B02266g I 0.000
YQE_11555 Dendroctonus ponderosae YQE_11555 I 0.000
Z517_08752 Fonsecaea pedrosoi Z517_08752 I 0.000
Z518_08063 Rhinocladiella mackenziei Z518_08063 I 0.000
Z519_03381 Cladophialophora bantiana Z519_03381 I 0.000
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I 0.000
ZBAI_00827 Zygosaccharomyces bailii ZBAI_00827 I 0.000
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I 0.000
ZBAI_06138 Zygosaccharomyces bailii ZBAI_06138 I 0.000
ZYRO0C16214g Zygosaccharomyces rouxii ZYRO0C16214g I 0.000
ZYRO0D15312g Zygosaccharomyces rouxii ZYRO0D15312g I 0.000