AGL77 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G38740 T252921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL78
M10932_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT5G65330_01 		0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G38740.1 MADS box 19 65

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.000
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.000
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.000
Bo9g009240 Brassica oleracea Bo9g009240 N 0.000
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.000
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.000
Ca_06943 Cicer arietinum Ca_06943 N 0.000
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.000
CIGR1 Oryza sativa OS07G0545800 N 0.000
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.000
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.000
evm.TU.supercontig_3097.1 Carica papaya evm.TU.supercontig_3097.1 N 0.000
F775_07373 Aegilops tauschii F775_07373 N 0.000
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.000
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.000
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.000
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.000
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.000
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.000
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.000
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.000
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.000
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.000
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.000
LjSGA_123909.1 Lotus japonicus LjSGA_123909.1 N 0.000
LPERR07G15240 Leersia perrieri LPERR07G15240 N 0.000
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.000
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.000
MDP0000205622 Malus domestica MDP0000205622 N 0.000
mgf007614m Mimulus guttatus mgf007614m N 0.000
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.000
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.000
OB07G23640 Oryza brachyantha OB07G23640 N 0.000
OBART07G17780 Oryza barthii OBART07G17780 N 0.000
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.000
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.000
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.000
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.000
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.000
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.000
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.000
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.000
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.000
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.000
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.000
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.000
PK07026.1 Cannabis sativa PK07026.1 N 0.000
Pm029452 Prunus mume Pm029452 N 0.000
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.000
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.000
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.000
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.000
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.000
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.000
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.000
Si029156m.g Setaria italica Si029156m.g N 0.000
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.000
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.000
TCM_031132 Theobroma cacao TCM_031132 N 0.000
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.000
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.000
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.000
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.000