Bo7g080890 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo7g080890 T253163_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g080890.1 MADS box 10 55

Links

Other MADS box family TFs
Other Brassica oleracea TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015007 Calypte anna Aan_R015007 N
Afo_R012887 Aptenodytes forsteri Afo_R012887 N
Brh_R000757 Buceros rhinoceros Brh_R000757 N
ENSAMEG00000019149 Ailuropoda melanoleuca ENSAMEG00000019149 N
ENSCPOG00000022575 Cavia porcellus ENSCPOG00000022575 N
ENSCSAG00000000386 Chlorocebus sabaeus ENSCSAG00000000386 N
ENSLACG00000001352 Latimeria chalumnae ENSLACG00000001352 N
ENSMEUG00000006670 Macropus eugenii ENSMEUG00000006670 N
ENSMICG00000012196 Microcebus murinus ENSMICG00000012196 N
ENSMPUG00000019997 Mustela putorius furo ENSMPUG00000019997 N
ENSNLEG00000005902 Nomascus leucogenys ENSNLEG00000005902 N
ENSOARG00000015061 Ovis aries ENSOARG00000015061 N
ENSP00000355162 Macaca fascicularis ENSP00000355162 N
ENSP00000355162-D1 Bos grunniens ENSP00000355162-D1 N
ENSPANG00000002290 Papio anubis ENSPANG00000002290 N
ENSPPYG00000015125 Pongo abelii ENSPPYG00000015125 N
ENSPSIG00000000540 Pelodiscus sinensis ENSPSIG00000000540 N
ENSSHAG00000007826 Sarcophilus harrisii ENSSHAG00000007826 N
ENSSTOG00000020903 Ictidomys tridecemlineatus ENSSTOG00000020903 N
ENSTSYG00000006216 Tarsius syrichta ENSTSYG00000006216 N
Gfo_R010567 Geospiza fortis Gfo_R010567 N
Tal_R011337 Tyto alba Tal_R011337 N
Tigd4 Rattus norvegicus ENSRNOG00000010741 N
TIGD4 Pteropus vampyrus ENSPVAG00000013544 N
TIGD4 Pan troglodytes ENSPTRG00000016518 N
Tigd4 Mus musculus ENSMUSG00000047819 N
TIGD4 Taeniopygia guttata ENSTGUG00000005046 N
TIGD4 Tursiops truncatus ENSTTRG00000016046 N
TIGD4 Echinops telfairi ENSETEG00000011110 N
TIGD4 Bos taurus ENSBTAG00000009161 N
TIGD4 Canis familiaris ENSCAFG00000008168 N
TIGD4 Choloepus hoffmanni ENSCHOG00000003926 N
TIGD4 Callithrix jacchus ENSCJAG00000021812 N
TIGD4 Dasypus novemcinctus ENSDNOG00000006525 N
Tigd4 Dipodomys ordii ENSDORG00000008170 N
TIGD4 Equus caballus ENSECAG00000004395 N
TIGD4 Erinaceus europaeus ENSEEUG00000001554 N
TIGD4 Procavia capensis ENSPCAG00000014843 N
TIGD4 Felis catus ENSFCAG00000028877 N
TIGD4 Homo sapiens ENSG00000169989 N
TIGD4 Gorilla gorilla ENSGGOG00000011836 N
TIGD4 Loxodonta africana ENSLAFG00000028471 N
TIGD4 Myotis lucifugus ENSMLUG00000028008 N
TIGD4 Macaca mulatta ENSMMUG00000018489 N
TIGD4 Monodelphis domestica ENSMODG00000001071 N
TIGD4 Otolemur garnettii ENSOGAG00000005277 N