ONIVA04G08280 (Oryza nivara)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ONIVA04G08280 T255248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G08280.1 MADS box 11 60

Links

Other MADS box family TFs
Other Oryza nivara TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G06070 Arabidopsis thaliana AT1G06070 D
Bo5g007170 Brassica oleracea Bo5g007170 I
Bo8g005940 Brassica oleracea Bo8g005940 I
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I
Bra015471 Brassica rapa Bra015471 I
Bra030637 Brassica rapa Bra030637 I
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I
Carubv10008993m.g Capsella rubella Carubv10008993m.g I
cassava32399.m1 Manihot esculenta cassava32399.m1 I
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I
Ca_02692 Cicer arietinum Ca_02692 I
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I
Cla022201 Citrullus lanatus Cla022201 I
Cucsa.062530 Cucumis sativus Cucsa.062530 I
Cucsa.251880 Cucumis sativus Cucsa.251880 I
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I
F775_13434 Aegilops tauschii F775_13434 I
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I
GLYMA11G13510 Glycine max GLYMA11G13510 I
GLYMA12G05520 Glycine max GLYMA12G05520 I
GLYMA13G42030 Glycine max GLYMA13G42030 I
GLYMA15G03350 Glycine max GLYMA15G03350 I
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I
Lus10008150.g Linum usitatissimum Lus10008150.g I
Lus10019376.g Linum usitatissimum Lus10019376.g I
MDP0000234166 Malus domestica MDP0000234166 I
MDP0000435971 Malus domestica MDP0000435971 I
MLOC_64781 Hordeum vulgare MLOC_64781 I
OB09G23080 Oryza brachyantha OB09G23080 I
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I
OMERI09G12160 Oryza meridionalis OMERI09G12160 I
PK20942.1 Cannabis sativa PK20942.1 D
Pm007522 Prunus mume Pm007522 I
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I
RF2A Oryza sativa OS09G0516200 I
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I
TCM_019998 Theobroma cacao TCM_019998 I
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I
TRIUR3_16287 Triticum urartu TRIUR3_16287 I
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I