Bostr.26326s0009 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.26326s0009 T257614_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL33
M10911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT2G26320_01 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26326s0009.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Boechera stricta TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB21580 Xenopus laevis AAB21580 I
AAB22139 Xenopus laevis AAB22139 I
AAL11024 Xenopus tropicalis AAL11024 I
Aan_R003723 Calypte anna Aan_R003723 I
Aan_R006110 Calypte anna Aan_R006110 I
AAO11649 Xenopus laevis AAO11649 I
ABU42126 Xenopus laevis ABU42126 I
Afo_R014067 Aptenodytes forsteri Afo_R014067 I
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I
Alligator_sinensis_CCG018754.1 Alligator sinensis Alligator_sinensis_CCG018754.1 I
Brh_R000054 Buceros rhinoceros Brh_R000054 I
CLEC002330 Cimex lectularius CLEC002330 I
D917_06339 Trichinella nativa D917_06339 I
D918_04086 Trichuris suis D918_04086 I
EFV52759 Trichinella spiralis EFV52759 I
ENSAMEG00000012326 Ailuropoda melanoleuca ENSAMEG00000012326 I
ENSAMEG00000013193 Ailuropoda melanoleuca ENSAMEG00000013193 I
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I
ENSAMXG00000000425 Astyanax mexicanus ENSAMXG00000000425 I
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I
ENSAMXG00000007437 Astyanax mexicanus ENSAMXG00000007437 I
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I
ENSBTAP00000007923-D1 Bos grunniens ENSBTAP00000007923-D1 I
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I
ENSCSAG00000003889 Chlorocebus sabaeus ENSCSAG00000003889 I
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I
ENSCSAG00000014291 Chlorocebus sabaeus ENSCSAG00000014291 I
ENSFALG00000002471 Ficedula albicollis ENSFALG00000002471 I
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I
ENSLACG00000010731 Latimeria chalumnae ENSLACG00000010731 I
ENSLACG00000014874 Latimeria chalumnae ENSLACG00000014874 I
ENSLOCG00000010722 Lepisosteus oculatus ENSLOCG00000010722 I
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I
ENSMEUG00000015462 Macropus eugenii ENSMEUG00000015462 I
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I
ENSMICG00000011211 Microcebus murinus ENSMICG00000011211 I
ENSMMUG00000000064 Macaca mulatta ENSMMUG00000000064 I
ENSMPUG00000004935 Mustela putorius furo ENSMPUG00000004935 I
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I
ENSNLEG00000005207 Nomascus leucogenys ENSNLEG00000005207 I
ENSNLEG00000018108 Nomascus leucogenys ENSNLEG00000018108 I
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I
ENSOARG00000015159 Ovis aries ENSOARG00000015159 I
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I
ENSONIG00000019313 Oreochromis niloticus ENSONIG00000019313 I
ENSP00000228641 Macaca fascicularis ENSP00000228641 I
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I
ENSP00000228644 Macaca fascicularis ENSP00000228644 I
ENSP00000241651 Macaca fascicularis ENSP00000241651 I
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I
ENSPANG00000016865 Papio anubis ENSPANG00000016865 I
ENSPANG00000020394 Papio anubis ENSPANG00000020394 I
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I
ENSPFOG00000017279 Poecilia formosa ENSPFOG00000017279 I
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I
ENSPPYG00000000338 Pongo abelii ENSPPYG00000000338 I
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I
ENSPPYG00000004800 Pongo abelii ENSPPYG00000004800 I
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I
ENSSHAG00000016307 Sarcophilus harrisii ENSSHAG00000016307 I
ENSSSCG00000015475 Sus scrofa ENSSSCG00000015475 I
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I
ENSSTOG00000015810 Ictidomys tridecemlineatus ENSSTOG00000015810 I
ENSSTOG00000028049 Ictidomys tridecemlineatus ENSSTOG00000028049 I
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I
ENSTSYG00000003282 Tarsius syrichta ENSTSYG00000003282 I
ENSTSYG00000009118 Tarsius syrichta ENSTSYG00000009118 I
ENSXMAG00000003931 Xiphophorus maculatus ENSXMAG00000003931 I
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I
Gfo_R003967 Geospiza fortis Gfo_R003967 I
Gfo_R007711 Geospiza fortis Gfo_R007711 I
MYF5 Anolis carolinensis ENSACAG00000014431 I
MYF5 Bos taurus ENSBTAG00000026972 I
MYF5 Canis familiaris ENSCAFG00000005808 I
MYF5 Choloepus hoffmanni ENSCHOG00000008319 I
MYF5 Callithrix jacchus ENSCJAG00000019340 I
MYF5 Cavia porcellus ENSCPOG00000007766 I
myf5 Danio rerio ENSDARG00000007277 I
MYF5 Dasypus novemcinctus ENSDNOG00000034747 I
Myf5 Dipodomys ordii ENSDORG00000015437 I
MYF5 Equus caballus ENSECAG00000020047 I
MYF5 Erinaceus europaeus ENSEEUG00000011612 I
MYF5 Echinops telfairi ENSETEG00000011255 I
MYF5 Felis catus ENSFCAG00000015011 I
MYF5 Homo sapiens ENSG00000111049 D
MYF5 Gallus gallus ENSGALG00000028091 I
MYF5 Gorilla gorilla ENSGGOG00000004366 I
MYF5 Loxodonta africana ENSLAFG00000016473 I
MYF5 Myotis lucifugus ENSMLUG00000004943 I
MYF5 Macaca mulatta ENSMMUG00000011669 I
MYF5 Monodelphis domestica ENSMODG00000020478 I
Myf5 Mus musculus ENSMUSG00000000435 D
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I
MYF5 Oryctolagus cuniculus ENSOCUG00000025477 I
MYF5 Otolemur garnettii ENSOGAG00000001039 I
MYF5 Ochotona princeps ENSOPRG00000009007 I
myf5 Oryzias latipes ENSORLG00000016257 I
MYF5 Procavia capensis ENSPCAG00000001722 I
MYF5 Pan troglodytes ENSPTRG00000005261 I
MYF5 Pteropus vampyrus ENSPVAG00000003336 I
Myf5 Rattus norvegicus ENSRNOG00000004768 I
MYF5 Sorex araneus ENSSARG00000008217 I
MYF5 Sus scrofa ENSSSCG00000000937 I
MYF5 Tupaia belangeri ENSTBEG00000008363 I
myf5 Tetraodon nigroviridis ENSTNIG00000011406 I
myf5 Takifugu rubripes ENSTRUG00000010781 I
MYF5 Tursiops truncatus ENSTTRG00000014691 I
MYF5 Vicugna pacos ENSVPAG00000001927 I
myf5 Xenopus tropicalis XB-GENE-493550 I
myf5.L Xenopus laevis XB-GENE-866267 I
MYF6 Anolis carolinensis ENSACAG00000022851 I
MYF6 Bos taurus ENSBTAG00000014003 I
MYF6 Canis familiaris ENSCAFG00000005805 I
MYF6 Callithrix jacchus ENSCJAG00000019339 I
myf6 Danio rerio ENSDARG00000029830 I
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I
Myf6 Dipodomys ordii ENSDORG00000015435 I
MYF6 Equus caballus ENSECAG00000018919 I
MYF6 Felis catus ENSFCAG00000015010 I
MYF6 Homo sapiens ENSG00000111046 D
myf6 Gasterosteus aculeatus ENSGACG00000020008 I
MYF6 Gallus gallus ENSGALG00000010936 I
MYF6 Gorilla gorilla ENSGGOG00000004369 I
MYF6 Loxodonta africana ENSLAFG00000016476 I
MYF6 Microcebus murinus ENSMICG00000004274 I
MYF6 Myotis lucifugus ENSMLUG00000004940 I
MYF6 Macaca mulatta ENSMMUG00000011667 I
MYF6 Monodelphis domestica ENSMODG00000020477 I
Myf6 Mus musculus ENSMUSG00000035923 D
MYF6 Ornithorhynchus anatinus ENSOANG00000004854 I
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I
MYF6 Otolemur garnettii ENSOGAG00000001038 I
MYF6 Ochotona princeps ENSOPRG00000008999 I
myf6 Oryzias latipes ENSORLG00000016261 I
MYF6 Procavia capensis ENSPCAG00000001692 I
MYF6 Pan troglodytes ENSPTRG00000005260 I
MYF6 Pteropus vampyrus ENSPVAG00000003335 I
Myf6 Rattus norvegicus ENSRNOG00000004878 I
MYF6 Sorex araneus ENSSARG00000008211 I
MYF6 Sus scrofa ENSSSCG00000026533 I
MYF6 Tupaia belangeri ENSTBEG00000007822 I
MYF6 Taeniopygia guttata ENSTGUG00000007751 I
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I
myf6 Takifugu rubripes ENSTRUG00000010842 I
MYF6 Tursiops truncatus ENSTTRG00000014689 I
MYF6 Vicugna pacos ENSVPAG00000001926 I
myf6 Xenopus tropicalis XB-GENE-998203 I
myf6.L Xenopus laevis XB-GENE-6252334 I
myf6.S Xenopus laevis XB-GENE-998208 I
myod1 Gasterosteus aculeatus ENSGACG00000008444 I
myod1 Gasterosteus aculeatus ENSGACG00000017350 I
myod1 Oryzias latipes ENSORLG00000000694 I
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I
MYOG Anolis carolinensis ENSACAG00000004818 I
MYOG Bos taurus ENSBTAG00000006030 I
MYOG Canis familiaris ENSCAFG00000010309 I
MYOG Callithrix jacchus ENSCJAG00000006443 I
MYOG Cavia porcellus ENSCPOG00000023459 I
myog Danio rerio ENSDARG00000009438 I
MYOG Dasypus novemcinctus ENSDNOG00000032549 I
MYOG Equus caballus ENSECAG00000015955 I
MYOG Erinaceus europaeus ENSEEUG00000011702 I
MYOG Echinops telfairi ENSETEG00000003043 I
MYOG Felis catus ENSFCAG00000013108 I
MYOG Homo sapiens ENSG00000122180 D
myog Gasterosteus aculeatus ENSGACG00000000349 I
MYOG Gallus gallus ENSGALG00000000172 I
MYOG Gorilla gorilla ENSGGOG00000002115 I
MYOG Loxodonta africana ENSLAFG00000013113 I
MYOG Meleagris gallopavo ENSMGAG00000002212 I
MYOG Myotis lucifugus ENSMLUG00000016127 I
MYOG Monodelphis domestica ENSMODG00000001009 I
Myog Mus musculus ENSMUSG00000026459 D
MYOG Ornithorhynchus anatinus ENSOANG00000002107 I
MYOG Oryctolagus cuniculus ENSOCUG00000011548 I
MYOG Otolemur garnettii ENSOGAG00000029573 I
MYOG Ochotona princeps ENSOPRG00000014753 I
myog Oryzias latipes ENSORLG00000015906 I
MYOG Procavia capensis ENSPCAG00000006860 I
MYOG Pan troglodytes ENSPTRG00000001866 I
MYOG Pteropus vampyrus ENSPVAG00000013141 I
Myog Rattus norvegicus ENSRNOG00000030743 I
MYOG Tupaia belangeri ENSTBEG00000017364 I
MYOG Taeniopygia guttata ENSTGUG00000001380 I
myog Tetraodon nigroviridis ENSTNIG00000007278 I
myog Takifugu rubripes ENSTRUG00000001200 I
MYOG Tursiops truncatus ENSTTRG00000000710 I
MYOG Vicugna pacos ENSVPAG00000010566 I
myog Xenopus tropicalis XB-GENE-490105 I
myog.L Xenopus laevis XB-GENE-6252382 I
myog.S Xenopus laevis XB-GENE-865934 I
Myotis_brandtii_MYF5_10034131 Myotis brandtii Myotis_brandtii_MYF5_10034131 I
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I
Ogr08795 Ophisaurus gracilis Ogr08795 I
Pvit_10244 Pogona vitticeps Pvit_10244 I
Pvit_15256 Pogona vitticeps Pvit_15256 I
RPRC009735 Rhodnius prolixus RPRC009735 I
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I