Carubv10006209m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10006209m.g T257744_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006209m MADS box 12 63

Links

Other MADS box family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002769 Aedes aegypti AAEL002769 N 0.000
AALB003341 Anopheles albimanus AALB003341 N 0.000
AARA009758 Anopheles arabiensis AARA009758 N 0.000
AATE019368 Anopheles atroparvus AATE019368 N 0.000
ACEP10070 Atta cephalotes ACEP10070 N 0.000
ACHR005874 Anopheles christyi ACHR005874 N 0.000
ACOM033416 Anopheles coluzzii ACOM033416 N 0.000
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I 0.000
AEPI001686 Anopheles epiroticus AEPI001686 N 0.000
AFAF012033 Anopheles farauti AFAF012033 N 0.000
AGAP004052 Anopheles gambiae AGAP004052 N 0.000
AMAM016687 Anopheles maculatus AMAM016687 N 0.000
AMEC020934 Anopheles melas AMEC020934 N 0.000
AMEM000031 Anopheles merus AMEM000031 N 0.000
AMIN002617 Anopheles minimus AMIN002617 N 0.000
AQUA008560 Anopheles quadriannulatus AQUA008560 N 0.000
ASTEI07079 Anopheles stephensi ASTEI07079 N 0.000
BGIBMGA005085 Bombyx mori BGIBMGA005085 N 0.000
CapteG2449 Capitella teleta CapteG2449 N 0.000
Cflo_00867--XP_392355.3_APIME Camponotus floridanus Cflo_00867--XP_392355.3_APIME N 0.000
D918_02806 Trichuris suis D918_02806 N 0.000
DAPPUDRAFT_290533 Daphnia pulex DAPPUDRAFT_290533 I 0.000
GA14403 Drosophila pseudoobscura FBgn0074431 N 0.000
GB55033 Apis mellifera GB55033 N 0.000
GF16857 Drosophila ananassae FBgn0093877 N 0.000
GH21437 Drosophila grimshawi FBgn0128899 N 0.000
GI22696 Drosophila mojavensis FBgn0145423 N 0.000
GK11290 Drosophila willistoni FBgn0213301 N 0.000
HMEL013966 Heliconius melpomene HMEL013966 N 0.000
Hsal_05147--XP_392355.3_APIME Harpegnathos saltator Hsal_05147--XP_392355.3_APIME N 0.000
ISCW008733 Ixodes scapularis ISCW008733 N 0.000
KGM_10139 Danaus plexippus KGM_10139 N 0.000
LCUP011133 Lucilia cuprina LCUP011133 N 0.000
LLOJ001671 Lutzomyia longipalpis LLOJ001671 N 0.000
nRc.2.0.1.g38267 Romanomermis culicivorax nRc.2.0.1.g38267 N 0.000
PPAI010077 Phlebotomus papatasi PPAI010077 N 0.000
pros Drosophila virilis FBgn0028753 N 0.000
SINV18486 Solenopsis invicta SINV18486 N 0.000
SMAR007154 Strigamia maritima SMAR007154 N 0.000
T265_07444 Opisthorchis viverrini T265_07444 N 0.000
tetur02g12740 Tetranychus urticae tetur02g12740 N 0.000