Eucgr.E01734 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.E01734 T257948_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01734.1 MADS box 10 56

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004769 Ailuropoda melanoleuca ENSAMEG00000004769 I
ENSCSAG00000016621 Chlorocebus sabaeus ENSCSAG00000016621 I
ENSMPUG00000002775 Mustela putorius furo ENSMPUG00000002775 I
ENSNLEG00000005974 Nomascus leucogenys ENSNLEG00000005974 I
ENSOARG00000004589 Ovis aries ENSOARG00000004589 I
ENSP00000345809 Macaca fascicularis ENSP00000345809 I
ENSPANG00000008111 Papio anubis ENSPANG00000008111 I
ENSPPYG00000013958 Pongo abelii ENSPPYG00000013958 I
ZNF197 Equus caballus ENSECAG00000011611 I
ZNF197 Felis catus ENSFCAG00000021993 I
ZNF197 Homo sapiens ENSG00000186448 D
ZNF197 Macaca mulatta ENSMMUG00000017585 I
ZNF197 Dasypus novemcinctus ENSDNOG00000034353 I
ZNF197 Callithrix jacchus ENSCJAG00000001817 I
ZNF197 Choloepus hoffmanni ENSCHOG00000013986 I
ZNF197 Otolemur garnettii ENSOGAG00000028821 I
ZNF197 Procavia capensis ENSPCAG00000009444 I
ZNF197 Pteropus vampyrus ENSPVAG00000013486 I
ZNF197 Sus scrofa ENSSSCG00000011304 I
ZNF197 Tursiops truncatus ENSTTRG00000006738 I
ZNF197 Vicugna pacos ENSVPAG00000006930 I
ZNF197 Bos taurus ENSBTAG00000037803 I