evm.TU.contig_35009 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35009 T258081_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35009.1 MADS box 10 53

Links

Other MADS box family TFs
Other Carica papaya TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.000
AAI66068 Xenopus tropicalis AAI66068 I 0.000
Aan_R007630 Calypte anna Aan_R007630 N 0.000
Afo_R015481 Aptenodytes forsteri Afo_R015481 N 0.000
Alligator_sinensis_CCG006942.1 Alligator sinensis Alligator_sinensis_CCG006942.1 N 0.000
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I 0.000
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.000
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.000
A_02404 Schistosoma haematobium A_02404 N 0.000
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.000
CapteG168974 Capitella teleta CapteG168974 N 0.000
CapteG223644 Capitella teleta CapteG223644 I 0.000
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.000
Cmyd_10011686 Chelonia mydas Cmyd_10011686 N 0.000
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I 0.000
csin100383 Clonorchis sinensis csin100383 I 0.000
DILT_0000604501 Diphyllobothrium latum DILT_0000604501 N 0.000
ENSACAG00000007044 Anolis carolinensis ENSACAG00000007044 N 0.000
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I 0.000
ENSAMEG00000004661 Ailuropoda melanoleuca ENSAMEG00000004661 I 0.000
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.000
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.000
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I 0.000
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.000
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.000
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.000
ENSAPLG00000004235 Anas platyrhynchos ENSAPLG00000004235 I 0.000
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I 0.000
ENSBTAP00000018875-D1 Bos grunniens ENSBTAP00000018875-D1 I 0.000
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.000
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I 0.000
ENSCSAG00000002587 Chlorocebus sabaeus ENSCSAG00000002587 I 0.000
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I 0.000
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.000
ENSECAG00000002502 Equus caballus ENSECAG00000002502 I 0.000
ENSECAG00000011159 Equus caballus ENSECAG00000011159 N 0.000
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.000
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I 0.000
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.000
ENSGMOG00000001960 Gadus morhua ENSGMOG00000001960 N 0.000
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.000
ENSGMOG00000003675 Gadus morhua ENSGMOG00000003675 I 0.000
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I 0.000
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.000
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I 0.000
ENSLACG00000002795 Latimeria chalumnae ENSLACG00000002795 N 0.000
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.000
ENSLACG00000016985 Latimeria chalumnae ENSLACG00000016985 I 0.000
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.000
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I 0.000
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.000
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.000
ENSMGAG00000006532 Meleagris gallopavo ENSMGAG00000006532 N 0.000
ENSMGAG00000011118 Meleagris gallopavo ENSMGAG00000011118 N 0.000
ENSMICG00000005972 Microcebus murinus ENSMICG00000005972 I 0.000
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.000
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.000
ENSMODG00000012526 Monodelphis domestica ENSMODG00000012526 I 0.000
ENSMODG00000015057 Monodelphis domestica ENSMODG00000015057 N 0.000
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.000
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I 0.000
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.000
ENSMPUG00000015272 Mustela putorius furo ENSMPUG00000015272 I 0.000
ENSNLEG00000001655 Nomascus leucogenys ENSNLEG00000001655 I 0.000
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.000
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.000
ENSOANG00000012287 Ornithorhynchus anatinus ENSOANG00000012287 N 0.000
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I 0.000
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.000
ENSOARG00000008340 Ovis aries ENSOARG00000008340 I 0.000
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.000
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.000
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.000
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.000
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.000
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.000
ENSP00000177694 Macaca fascicularis ENSP00000177694 I 0.000
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.000
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.000
ENSP00000384152 Macaca fascicularis ENSP00000384152 I 0.000
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.000
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.000
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.000
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I 0.000
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.000
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.000
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.000
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.000
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.000
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I 0.000
ENSPMAG00000003985 Petromyzon marinus ENSPMAG00000003985 I 0.000
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I 0.000
ENSPPYG00000008879 Pongo abelii ENSPPYG00000008879 I 0.000
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.000
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.000
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.000
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.000
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.000
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.000
ENSSHAG00000018315 Sarcophilus harrisii ENSSHAG00000018315 I 0.000
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.000
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.000
ENSSTOG00000001626 Ictidomys tridecemlineatus ENSSTOG00000001626 I 0.000
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.000
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.000
ENSTGUG00000003557 Taeniopygia guttata ENSTGUG00000003557 N 0.000
ENSTSYG00000004047 Tarsius syrichta ENSTSYG00000004047 N 0.000
ENSTSYG00000004248 Tarsius syrichta ENSTSYG00000004248 N 0.000
ENSTTRG00000006645 Tursiops truncatus ENSTTRG00000006645 I 0.000
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.000
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.000
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I 0.000
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.000
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.000
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I 0.000
EOMES Anolis carolinensis ENSACAG00000014201 I 0.000
EOMES Bos taurus ENSBTAG00000016920 I 0.000
EOMES Canis familiaris ENSCAFG00000005510 I 0.000
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.000
EOMES Cavia porcellus ENSCPOG00000004381 I 0.000
Eomes Dipodomys ordii ENSDORG00000016346 I 0.000
EOMES Equus caballus ENSECAG00000021052 I 0.000
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.000
EOMES Felis catus ENSFCAG00000003602 I 0.000
EOMES Homo sapiens ENSG00000163508 D 0.000
EOMES Gallus gallus ENSGALG00000027247 I 0.000
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.000
EOMES Loxodonta africana ENSLAFG00000004142 I 0.000
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.000
Eomes Mus musculus ENSMUSG00000032446 D 0.000
EOMES Ornithorhynchus anatinus ENSOANG00000012619 I 0.000
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.000
EOMES Procavia capensis ENSPCAG00000013650 I 0.000
EOMES Pan troglodytes ENSPTRG00000014705 I 0.000
EOMES Pteropus vampyrus ENSPVAG00000009999 I 0.000
eomes Xenopus tropicalis XB-GENE-479769 I 0.000
eomes.L Xenopus laevis XB-GENE-865305 I 0.000
eomes.S Xenopus laevis XB-GENE-6487182 I 0.000
eomesa Danio rerio ENSDARG00000006640 I 0.000
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.000
eomesa Oryzias latipes ENSORLG00000002320 I 0.000
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.000
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.000
eomesb Danio rerio ENSDARG00000104243 I 0.000
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.000
eomesb Oryzias latipes ENSORLG00000005393 I 0.000
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.000
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.000
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.000
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.000
Gfo_R006963 Geospiza fortis Gfo_R006963 N 0.000
HelroG98030 Helobdella robusta HelroG98030 I 0.000
ISCW019283 Ixodes scapularis ISCW019283 N 0.000
LotgiG129911 Lottia gigantea LotgiG129911 I 0.000
Myotis_brandtii_Eomes_10021705 Myotis brandtii Myotis_brandtii_Eomes_10021705 N 0.000
Myotis_brandtii_KPNB1_10030428 Myotis brandtii Myotis_brandtii_KPNB1_10030428 I 0.000
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.000
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I 0.000
Ocbimv22004458m.g Octopus bimaculoides Ocbimv22004458m.g I 0.000
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I 0.000
Ogr12599 Ophisaurus gracilis Ogr12599 N 0.000
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.000
Pvit_13952 Pogona vitticeps Pvit_13952 N 0.000
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.000
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.000
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.000
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.000
SSLN_0000647101 Schistocephalus solidus SSLN_0000647101 N 0.000
T265_12717 Opisthorchis viverrini T265_12717 I 0.000
TBR1 Bos taurus ENSBTAG00000021692 I 0.000
TBR1 Canis familiaris ENSCAFG00000009984 I 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.000
TBR1 Felis catus ENSFCAG00000025073 I 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.000
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.000
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.000
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.000
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.000
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.000
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.000
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.000
Tbr1 Rattus norvegicus ENSRNOG00000005049 I 0.000
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.000
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.000
tbr1a Danio rerio ENSDARG00000076259 I 0.000
tbr1b Danio rerio ENSDARG00000004712 I 0.000
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.000
tbr1b Oryzias latipes ENSORLG00000016828 I 0.000
tbr1b Tetraodon nigroviridis ENSTNIG00000016497 I 0.000
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.000
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.000
TBX20 Sorex araneus ENSSARG00000003223 I 0.000
TBX21 Bos taurus ENSBTAG00000014199 I 0.000
TBX21 Canis familiaris ENSCAFG00000016705 I 0.000
TBX21 Callithrix jacchus ENSCJAG00000007796 I 0.000
TBX21 Cavia porcellus ENSCPOG00000026273 I 0.000
tbx21 Danio rerio ENSDARG00000004473 I 0.000
Tbx21 Dipodomys ordii ENSDORG00000013302 I 0.000
TBX21 Erinaceus europaeus ENSEEUG00000008994 N 0.000
TBX21 Felis catus ENSFCAG00000010607 I 0.000
TBX21 Homo sapiens ENSG00000073861 D 0.000
tbx21 Gasterosteus aculeatus ENSGACG00000003829 N 0.000
TBX21 Gorilla gorilla ENSGGOG00000002208 I 0.000
TBX21 Myotis lucifugus ENSMLUG00000014542 I 0.000
TBX21 Macaca mulatta ENSMMUG00000007098 I 0.000
Tbx21 Mus musculus ENSMUSG00000001444 D 0.000
TBX21 Oryctolagus cuniculus ENSOCUG00000012907 I 0.000
TBX21 Otolemur garnettii ENSOGAG00000006160 I 0.000
TBX21 Ochotona princeps ENSOPRG00000003888 N 0.000
tbx21 Oryzias latipes ENSORLG00000012193 N 0.000
TBX21 Pan troglodytes ENSPTRG00000009335 I 0.000
TBX21 Pteropus vampyrus ENSPVAG00000004921 I 0.000
Tbx21 Rattus norvegicus ENSRNOG00000009427 I 0.000
TBX21 Sus scrofa ENSSSCG00000017517 I 0.000
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.000
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.000
TBX21 Tursiops truncatus ENSTTRG00000004723 N 0.000
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.000
TBX4 Monodelphis domestica ENSMODG00000014216 I 0.000
Tbx4 Mus musculus ENSMUSG00000000094 D 0.000
TBX5 Bos taurus ENSBTAG00000011384 I 0.000
TBX5 Canis familiaris ENSCAFG00000009189 I 0.000
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.000
TBX5 Cavia porcellus ENSCPOG00000014558 I 0.000
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I 0.000
TBX5 Equus caballus ENSECAG00000017114 I 0.000
TBX5 Felis catus ENSFCAG00000005574 I 0.000
TBX5 Homo sapiens ENSG00000089225 D 0.000
TBX5 Gallus gallus ENSGALG00000008253 I 0.000
TBX5 Gorilla gorilla ENSGGOG00000013775 I 0.000
TBX5 Loxodonta africana ENSLAFG00000010125 I 0.000
TBX5 Meleagris gallopavo ENSMGAG00000010075 I 0.000
TBX5 Myotis lucifugus ENSMLUG00000016530 I 0.000
TBX5 Macaca mulatta ENSMMUG00000016202 I 0.000
Tbx5 Mus musculus ENSMUSG00000018263 D 0.000
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I 0.000
TBX5 Otolemur garnettii ENSOGAG00000016204 I 0.000
TBX5 Pan troglodytes ENSPTRG00000005496 I 0.000
Tbx5 Rattus norvegicus ENSRNOG00000001399 I 0.000
TBX5 Sus scrofa ENSSSCG00000009867 I 0.000
TBX5 Tursiops truncatus ENSTTRG00000000980 I 0.000
tbx5 Xenopus tropicalis XB-GENE-486855 I 0.000
tbx5.L Xenopus laevis XB-GENE-865653 I 0.000
tbx5.S Xenopus laevis XB-GENE-6253071 N 0.000
tbx5a Danio rerio ENSDARG00000024894 I 0.000
tbx5a Oryzias latipes ENSORLG00000007339 I 0.000
XP_001195863 Strongylocentrotus purpuratus XP_001195863 D 0.000