CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_135.5
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_135.5
T258171_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_135.5
MADS box
10
58
YITNDSIRKAMFKNKKKGMIKKVSKLSTLCNVKACAIIYNPYDSQLEVW
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_195724
Agaricus bisporus
AGABI2DRAFT_195724
N
0.000
BN946_scf185015.g136
Trametes cinnabarina
BN946_scf185015.g136
N
0.000
BOTBODRAFT_26540
Botryobasidium botryosum
BOTBODRAFT_26540
N
0.000
CC1G_01461
Coprinopsis cinerea
CC1G_01461
N
0.000
CERSUDRAFT_80180
Ceriporiopsis subvermispora
CERSUDRAFT_80180
N
0.000
CY34DRAFT_22781
Suillus luteus
CY34DRAFT_22781
N
0.000
DICSQDRAFT_58350
Dichomitus squalens
DICSQDRAFT_58350
N
0.000
estExt_fgenesh2_pg.C_40332
Heterobasidion annosum
estExt_fgenesh2_pg.C_40332
N
0.000
fgenesh1_pg.C_scaffold_2000219
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000219
N
0.000
fgeneshTM_pg.3_#_605
Tremella mesenterica
fgeneshTM_pg.3_#_605
N
0.000
FOMPIDRAFT_1125748
Fomitopsis pinicola
FOMPIDRAFT_1125748
N
0.000
GALMADRAFT_133470
Galerina marginata
GALMADRAFT_133470
N
0.000
GLOTRDRAFT_135965
Gloeophyllum trabeum
GLOTRDRAFT_135965
N
0.000
GYMLUDRAFT_179245
Gymnopus luxurians
GYMLUDRAFT_179245
N
0.000
HETIRDRAFT_449677
Heterobasidion irregulare
HETIRDRAFT_449677
N
0.000
JAAARDRAFT_52170
Jaapia argillacea
JAAARDRAFT_52170
N
0.000
K443DRAFT_131560
Laccaria amethystina
K443DRAFT_131560
N
0.000
LACBIDRAFT_292733
Laccaria bicolor
LACBIDRAFT_292733
N
0.000
M378DRAFT_175598
Amanita muscaria
M378DRAFT_175598
N
0.000
M404DRAFT_678760
Pisolithus tinctorius
M404DRAFT_678760
N
0.000
M407DRAFT_227259
Tulasnella calospora
M407DRAFT_227259
N
0.000
M408DRAFT_112963
Serendipita vermifera
M408DRAFT_112963
N
0.000
M408DRAFT_331100
Serendipita vermifera
M408DRAFT_331100
N
0.000
M413DRAFT_317271
Hebeloma cylindrosporum
M413DRAFT_317271
N
0.000
Moror_3334
Moniliophthora roreri
Moror_3334
N
0.000
PAXRUDRAFT_310605
Paxillus rubicundulus
PAXRUDRAFT_310605
N
0.000
PHACADRAFT_250026
Phanerochaete carnosa
PHACADRAFT_250026
N
0.000
PHLGIDRAFT_14903
Phlebiopsis gigantea
PHLGIDRAFT_14903
N
0.000
PIIN_04557
Piriformospora indica
PIIN_04557
N
0.000
PILCRDRAFT_98744
Piloderma croceum
PILCRDRAFT_98744
N
0.000
PISMIDRAFT_518962
Pisolithus microcarpus
PISMIDRAFT_518962
N
0.000
PLEOSDRAFT_1112373
Pleurotus ostreatus
PLEOSDRAFT_1112373
N
0.000
SCHCODRAFT_255004
Schizophyllum commune
SCHCODRAFT_255004
N
0.000
SCLCIDRAFT_1214056
Scleroderma citrinum
SCLCIDRAFT_1214056
N
0.000
SERLA73DRAFT_164436
Serpula lacrymans
SERLA73DRAFT_164436
N
0.000