evm.TU.supercontig_135.5 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_135.5 T258171_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_135.5 MADS box 10 58

Links

Other MADS box family TFs
Other Carica papaya TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I 0.793
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.778
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.778
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.765
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.756
mgf026186m Mimulus guttatus mgf026186m I 0.750
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.750
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.750
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.750
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.729
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.729
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.729
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.729
MDP0000846004 Malus domestica MDP0000846004 I 0.729
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.711
Pm004396 Prunus mume Pm004396 I 0.711
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.711
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.711
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.708
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.708
30128.m008984 Ricinus communis 30128.m008984 I 0.708
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.708
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.708
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.708
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.708
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.708
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.708
MDP0000925348 Malus domestica MDP0000925348 I 0.708
30199.m000879 Ricinus communis 30199.m000879 I 0.702
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.702
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N 0.700
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.700