evm.TU.contig_46342 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_46342 T258136_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_46342.1 MADS box 1 31

Links

Other MADS box family TFs
Other Carica papaya TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 1.000
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.867
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.867
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.867
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.867
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.833
MDP0000925348 Malus domestica MDP0000925348 I 0.833
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.800
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.800
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.800
MDP0000846004 Malus domestica MDP0000846004 I 0.800
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.767
evm.TU.supercontig_135.3 Carica papaya evm.TU.supercontig_135.3 N 0.767
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.767
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.765
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.733
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.733
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.733
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.733
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.733
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.700
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.700
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.700
TCM_042799 Theobroma cacao TCM_042799 I 0.700
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.700
Ca_13275 Cicer arietinum Ca_13275 I 0.700
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.700
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N 0.700
evm.TU.contig_40164 Carica papaya evm.TU.contig_40164 N 0.700
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.700
evm.TU.supercontig_135.5 Carica papaya evm.TU.supercontig_135.5 N 0.700
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.700
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N 0.700
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.700
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.700