GSMUA_Achr2G18400_001 (Musa acuminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GSMUA_Achr2G18400_001 T254364_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr2P18400_001 MADS box 10 58

Links

Other MADS box family TFs
Other Musa acuminata TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.822
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.812
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.806
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.800
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.792
Si019470m.g Setaria italica Si019470m.g N 0.786
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.778
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.778
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.778
GSMUA_AchrUn_randomG17230_001 Musa acuminata GSMUA_AchrUn_randomG17230_001 N 0.771
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.756
Pm004396 Prunus mume Pm004396 I 0.756
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.756
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.756
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.750
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.744
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.739
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.739
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.733
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.733
Ca_13275 Cicer arietinum Ca_13275 I 0.733
Aquca_003_00269 Aquilegia coerulea Aquca_003_00269 N 0.733
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.733
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.729
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.729
MDP0000846004 Malus domestica MDP0000846004 I 0.729
MDP0000925348 Malus domestica MDP0000925348 I 0.729
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.729
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.727
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.727
30199.m000879 Ricinus communis 30199.m000879 I 0.723
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.723
evm.TU.contig_28448.2 Carica papaya evm.TU.contig_28448.2 N 0.720
evm.TU.contig_43908 Carica papaya evm.TU.contig_43908 N 0.720
evm.TU.supercontig_1136.1 Carica papaya evm.TU.supercontig_1136.1 N 0.720
evm.TU.supercontig_185.4 Carica papaya evm.TU.supercontig_185.4 N 0.720
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.717
Pavir.J40580 Panicum virgatum Pavir.J40580 N 0.714
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.711
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.711
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.708
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.708
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.708
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.708
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.708
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.708
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.708
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.708
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.708
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.708
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N 0.708
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.706
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N 0.700
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.700