SapurV1A.0442s0180 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0442s0180 T259034_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0442s0180.1.p MADS box 10 58

Links

Other MADS box family TFs
Other Salix purpurea TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 1.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.896
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.896
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.875
MDP0000846004 Malus domestica MDP0000846004 I 0.875
30199.m000879 Ricinus communis 30199.m000879 I 0.851
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.844
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.844
Cla005226 Citrullus lanatus Cla005226 I 0.844
Pm004396 Prunus mume Pm004396 I 0.844
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.833
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.833
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.833
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.833
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.833
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.833
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I 0.815
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.812
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.812
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.812
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.812
MDP0000925348 Malus domestica MDP0000925348 I 0.812
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.794
Bra018490 Brassica rapa Bra018490 I 0.792
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.792
Ca_13275 Cicer arietinum Ca_13275 I 0.792
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.792
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.792
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.792
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.792
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.792
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.783
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.778
mgf026186m Mimulus guttatus mgf026186m I 0.773
AGL80 Arabidopsis thaliana AT5G48670 D 0.771
Bo2g104810 Brassica oleracea Bo2g104810 I 0.771
TCM_026842 Theobroma cacao TCM_026842 I 0.771
30128.m008984 Ricinus communis 30128.m008984 I 0.771
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.771
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.771
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.771
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.771
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.771
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.771
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.771
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.761
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.761
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.761
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I 0.759
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.756
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.756
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.756
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.756
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.756
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.750
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.750
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.750
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.750
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.750
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.750
gene15899-v1.0-hybrid Fragaria vesca gene15899-v1.0-hybrid N 0.750
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.750
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.750
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.750
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.733
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N 0.733
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.733
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I 0.733
Bo9g078450 Brassica oleracea Bo9g078450 I 0.729
Bra029469 Brassica rapa Bra029469 I 0.729
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.729
TCM_025670 Theobroma cacao TCM_025670 I 0.729
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.729
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.729
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.729
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.729
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.729
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.729
gene04949-v1.0-hybrid Fragaria vesca gene04949-v1.0-hybrid I 0.729
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N 0.729
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.729
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.711
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.708
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.708
TCM_023041 Theobroma cacao TCM_023041 N 0.708
TCM_042799 Theobroma cacao TCM_042799 I 0.708
Ca_06495 Cicer arietinum Ca_06495 I 0.708
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.708
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.708
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.708
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N 0.708
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.708
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.708
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N 0.708
Gorai.011G189000 Gossypium raimondii Gorai.011G189000 N 0.708
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N 0.708
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.702
Pm003257 Prunus mume Pm003257 I 0.702
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.702