Gorai.004G054700 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.004G054700 T258395_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G054700.1 MADS box 10 58

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.792
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.771
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.771
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.756
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.750
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.750
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.750
Cla005226 Citrullus lanatus Cla005226 I 0.733
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.729
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.729
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.729
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N 0.729
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.729
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.729
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.727
evm.TU.contig_35265 Carica papaya evm.TU.contig_35265 I 0.727
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.727
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.723
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.711
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.711
Ca_13275 Cicer arietinum Ca_13275 I 0.711
Bo2g104810 Brassica oleracea Bo2g104810 I 0.708
TCM_025670 Theobroma cacao TCM_025670 I 0.708
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.708
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.708
MDP0000846004 Malus domestica MDP0000846004 I 0.708
Gorai.013G155300 Gossypium raimondii Gorai.013G155300 N 0.706
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N 0.702
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.702
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N 0.700