evm.TU.supercontig_22.66 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_22.66 T258203_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_22.66 MADS box 12 31

Links

Other MADS box family TFs
Other Carica papaya TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_06495 Cicer arietinum Ca_06495 I 0.750
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.750
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.750
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N 0.750
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.750
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.750
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.750
MTR_1g084950 Medicago truncatula MTR_1g084950 N 0.700
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.700
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.700
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.700
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.700
TCM_026842 Theobroma cacao TCM_026842 I 0.700
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.700
Ca_03592 Cicer arietinum Ca_03592 N 0.700
Ca_08934 Cicer arietinum Ca_08934 I 0.700
Cla009163 Citrullus lanatus Cla009163 I 0.700
Pm003257 Prunus mume Pm003257 I 0.700
mgf026186m Mimulus guttatus mgf026186m I 0.700
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.700
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.700
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.700
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.700
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.700
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.700
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N 0.700
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N 0.700
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.700
Gorai.011G189000 Gossypium raimondii Gorai.011G189000 N 0.700
Gorai.013G168300 Gossypium raimondii Gorai.013G168300 I 0.700
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.700
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.700
MDP0000846004 Malus domestica MDP0000846004 I 0.700
Pavir.Eb00487 Panicum virgatum Pavir.Eb00487 N 0.700
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.700
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.700
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.700