SapurV1A.0066s0310 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0066s0310 T258991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.851 0.851
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0066s0310.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Salix purpurea TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.979
TCM_026842 Theobroma cacao TCM_026842 I 0.936
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.909
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.909
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.896
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.896
30199.m000879 Ricinus communis 30199.m000879 I 0.894
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.889
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.889
Ca_13275 Cicer arietinum Ca_13275 I 0.889
Cla005226 Citrullus lanatus Cla005226 I 0.889
Pm004396 Prunus mume Pm004396 I 0.889
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.889
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.875
30128.m008984 Ricinus communis 30128.m008984 I 0.875
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.875
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.875
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.875
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.872
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.870
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I 0.870
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.867
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.854
TCM_025671 Theobroma cacao TCM_025671 I 0.851
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.848
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.848
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.844
Ca_06495 Cicer arietinum Ca_06495 I 0.841
mgf026186m Mimulus guttatus mgf026186m I 0.841
AGL80 Arabidopsis thaliana AT5G48670 D 0.833
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.833
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.833
MDP0000846004 Malus domestica MDP0000846004 I 0.833
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.830
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.830
MDP0000925348 Malus domestica MDP0000925348 I 0.830
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.830
LjSGA_104570.1 Lotus japonicus LjSGA_104570.1 I 0.828
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.826
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.826
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.826
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.822
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.822
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.818
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I 0.818
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I 0.818
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.812
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.812
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.812
Bo9g078450 Brassica oleracea Bo9g078450 I 0.809
Bra029469 Brassica rapa Bra029469 I 0.809
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.809
TCM_026845 Theobroma cacao TCM_026845 I 0.809
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.809
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.809
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.809
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.809
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.804
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.800
Bra018490 Brassica rapa Bra018490 I 0.792
TCM_025670 Theobroma cacao TCM_025670 I 0.792
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.792
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.792
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.792
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.792
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.791
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.791
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.787
TCM_042799 Theobroma cacao TCM_042799 I 0.787
Cla009163 Citrullus lanatus Cla009163 I 0.787
Pm003257 Prunus mume Pm003257 I 0.787
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.787
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.787
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.787
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.778
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.778
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.778
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.778
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.778
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.778
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I 0.778
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I 0.778
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I 0.778
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.778
Bo2g104810 Brassica oleracea Bo2g104810 I 0.771
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.771
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.771
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.771
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.762
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I 0.759
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.756
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.756
Gorai.013G210400 Gossypium raimondii Gorai.013G210400 I 0.756
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.750
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.750
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.750
TCM_042848 Theobroma cacao TCM_042848 N 0.745
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.745
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.745
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.745
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.745
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.745
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.745
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N 0.739
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N 0.739
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I 0.739
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.733
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.733
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N 0.733
AT3G05860 Arabidopsis thaliana AT3G05860 I 0.729
TCM_025676 Theobroma cacao TCM_025676 N 0.729
gene04949-v1.0-hybrid Fragaria vesca gene04949-v1.0-hybrid I 0.729
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.729
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.729
Ca_08934 Cicer arietinum Ca_08934 I 0.727
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N 0.727
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.723
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.723
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.723
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.723
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N 0.723
Gorai.013G210700 Gossypium raimondii Gorai.013G210700 N 0.723
Bra041022 Brassica rapa Bra041022 I 0.711
MTR_3g466980 Medicago truncatula MTR_3g466980 N 0.711
PRUPE_ppa017207mg Prunus persica PRUPE_ppa017207mg N 0.711
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I 0.711
evm.TU.contig_40164 Carica papaya evm.TU.contig_40164 N 0.711
evm.TU.supercontig_34.40 Carica papaya evm.TU.supercontig_34.40 N 0.711
GLYMA10G28320 Glycine max GLYMA10G28320 N 0.708
Ca_08369 Cicer arietinum Ca_08369 N 0.708
Bostr.2570s0083 Boechera stricta Bostr.2570s0083 I 0.708
evm.TU.supercontig_100.22 Carica papaya evm.TU.supercontig_100.22 N 0.708
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.708
Thhalv10019481m.g Eutrema salsugineum Thhalv10019481m.g I 0.708
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.706
GLYMA18G06040 Glycine max GLYMA18G06040 N 0.705
Thhalv10021183m.g Eutrema salsugineum Thhalv10021183m.g I 0.705
Cucsa.224270 Cucumis sativus Cucsa.224270 I 0.702
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I 0.702
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.702
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.702
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I 0.702
evm.TU.supercontig_265.3 Carica papaya evm.TU.supercontig_265.3 N 0.702
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.702
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N 0.702
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N 0.702
Lus10022325.g Linum usitatissimum Lus10022325.g N 0.702
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N 0.700