Eucgr.E01737 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.E01737 T257950_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01737.1 MADS box 10 56

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.957
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.957
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.935
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.870
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.870
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.848
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.848
TCM_026842 Theobroma cacao TCM_026842 I 0.848
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.848
Cla005226 Citrullus lanatus Cla005226 I 0.848
30199.m000879 Ricinus communis 30199.m000879 I 0.848
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.848
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.826
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.826
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.826
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.822
Pm004396 Prunus mume Pm004396 I 0.822
AGL80 Arabidopsis thaliana AT5G48670 D 0.804
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.804
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.804
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.804
Ca_13275 Cicer arietinum Ca_13275 I 0.804
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.804
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.804
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.804
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.804
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.804
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.804
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.804
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.804
Bo9g078450 Brassica oleracea Bo9g078450 I 0.783
Bra018490 Brassica rapa Bra018490 I 0.783
Bra029469 Brassica rapa Bra029469 I 0.783
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.783
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.783
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.783
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.783
MDP0000846004 Malus domestica MDP0000846004 I 0.783
MDP0000925348 Malus domestica MDP0000925348 I 0.783
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.783
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.783
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.783
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.783
30128.m008984 Ricinus communis 30128.m008984 I 0.771
Bo2g104810 Brassica oleracea Bo2g104810 I 0.761
TCM_025671 Theobroma cacao TCM_025671 I 0.761
TCM_026845 Theobroma cacao TCM_026845 I 0.761
Ca_06495 Cicer arietinum Ca_06495 I 0.761
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.761
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.761
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.761
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.761
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.761
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.761
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.761
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.761
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.756
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.739
TCM_025670 Theobroma cacao TCM_025670 I 0.739
Ca_08934 Cicer arietinum Ca_08934 I 0.739
Cla009163 Citrullus lanatus Cla009163 I 0.739
Pm003257 Prunus mume Pm003257 I 0.739
mgf026186m Mimulus guttatus mgf026186m I 0.739
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I 0.739
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.739
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.739
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.739
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.739
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.739
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.739
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.739
PRUPE_ppa017207mg Prunus persica PRUPE_ppa017207mg N 0.733
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.733
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I 0.733
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.717
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.717
MTR_4g032260 Medicago truncatula MTR_4g032260 N 0.717
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.717
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.717
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.717
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.717
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.717
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.717
Lus10022325.g Linum usitatissimum Lus10022325.g N 0.717
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.717
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I 0.717
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I 0.717
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.708
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.708