CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g032260
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_4g032260
T254772_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES87689
MADS box
10
54
FIVNDAARKAAYKKRKKSLFKKVVELSTLCGIEACAIVYGPYEPH
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g032290
Medicago truncatula
MTR_4g032290
N
0.978
Ca_08934
Cicer arietinum
Ca_08934
I
0.864
MTR_8g036130
Medicago truncatula
MTR_8g036130
N
0.841
MTR_4g031910
Medicago truncatula
MTR_4g031910
N
0.822
MTR_4g028800
Medicago truncatula
MTR_4g028800
N
0.756
MTR_4g032620
Medicago truncatula
MTR_4g032620
N
0.756
MTR_2g035610
Medicago truncatula
MTR_2g035610
N
0.739
GLYMA18G05916
Glycine max
GLYMA18G05916
N
0.733
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.733
Eucgr.E01737
Eucalyptus grandis
Eucgr.E01737
I
0.717
LjSGA_042497.2
Lotus japonicus
LjSGA_042497.2
I
0.717
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.711
GSMUA_Achr3G05500_001
Musa acuminata
GSMUA_Achr3G05500_001
I
0.711
Ca_06495
Cicer arietinum
Ca_06495
I
0.711
Aquca_007_00647
Aquilegia coerulea
Aquca_007_00647
I
0.711
Eucgr.B01824
Eucalyptus grandis
Eucgr.B01824
I
0.711
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.711
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.711
LjSGA_018236.1
Lotus japonicus
LjSGA_018236.1
I
0.711
GLYMA11G30640
Glycine max
GLYMA11G30640
N
0.705
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
0.704