CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_8g036130
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_8g036130
T254827_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH19045
MADS box
10
53
FIVNDAARKVTYKKRMKGLLKKIDELSTLCGIEACAIVYGPYEP
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08934
Cicer arietinum
Ca_08934
I
0.886
MTR_4g031910
Medicago truncatula
MTR_4g031910
N
0.841
MTR_4g032260
Medicago truncatula
MTR_4g032260
N
0.841
MTR_4g032290
Medicago truncatula
MTR_4g032290
N
0.818
MTR_4g032620
Medicago truncatula
MTR_4g032620
N
0.778
MTR_2g035610
Medicago truncatula
MTR_2g035610
N
0.773
LjSGA_042497.2
Lotus japonicus
LjSGA_042497.2
I
0.773
MTR_4g028800
Medicago truncatula
MTR_4g028800
N
0.756
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.750
GLYMA18G05916
Glycine max
GLYMA18G05916
N
0.733
LjSGA_018236.1
Lotus japonicus
LjSGA_018236.1
I
0.727
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.705
GLYMA18G05976
Glycine max
GLYMA18G05976
N
0.705
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.705
TCM_026842
Theobroma cacao
TCM_026842
I
0.705
Ca_06495
Cicer arietinum
Ca_06495
I
0.705
Aquca_007_00647
Aquilegia coerulea
Aquca_007_00647
I
0.705
Aquca_029_00010
Aquilegia coerulea
Aquca_029_00010
N
0.705
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.705
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.705
LjSGA_107301.1
Lotus japonicus
LjSGA_107301.1
I
0.705