CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08369
(
Cicer arietinum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ca_08369
T256898_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08369
MADS box
10
58
FITDDTARKASYNKRKKGFIKKVNELTTLCGIPACAIISSPFDTQPEVW
Links
Other
MADS box
family TFs
Other
Cicer arietinum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA10G28320
Glycine max
GLYMA10G28320
N
0.792
MTR_1g084950
Medicago truncatula
MTR_1g084950
N
0.771
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.771
LjSGA_024860.1
Lotus japonicus
LjSGA_024860.1
I
0.771
Bo9g078450
Brassica oleracea
Bo9g078450
I
0.750
Bra029469
Brassica rapa
Bra029469
I
0.750
MTR_5g047580
Medicago truncatula
MTR_5g047580
N
0.750
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
0.750
30128.m008984
Ricinus communis
30128.m008984
I
0.750
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.750
Bra018490
Brassica rapa
Bra018490
I
0.729
MTR_1g077320
Medicago truncatula
MTR_1g077320
N
0.729
MTR_7g011950
Medicago truncatula
MTR_7g011950
N
0.729
TCM_026842
Theobroma cacao
TCM_026842
I
0.729
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.729
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.729
Bo2g104810
Brassica oleracea
Bo2g104810
I
0.708
MTR_1g090697
Medicago truncatula
MTR_1g090697
N
0.708
MTR_1g090783
Medicago truncatula
MTR_1g090783
N
0.708
MTR_4g028720
Medicago truncatula
MTR_4g028720
N
0.708
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.708
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I
0.708
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.708
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.708
gene18029-v1.0-hybrid
Fragaria vesca
gene18029-v1.0-hybrid
I
0.708
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
0.708
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.708