CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g028720
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_4g028720
T254769_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES87531
MADS box
10
58
FISNDSTRKATYKRRKKGIIKKVRELTILCGIPACAIISDPFDSKTEVW
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_1g077300
Medicago truncatula
MTR_1g077300
N
0.917
MTR_7g011950
Medicago truncatula
MTR_7g011950
N
0.917
MTR_1g077320
Medicago truncatula
MTR_1g077320
N
0.896
MTR_5g047580
Medicago truncatula
MTR_5g047580
N
0.896
MTR_1g084950
Medicago truncatula
MTR_1g084950
N
0.875
GLYMA10G28320
Glycine max
GLYMA10G28320
N
0.771
Ca_03592
Cicer arietinum
Ca_03592
N
0.750
LjSGA_024860.1
Lotus japonicus
LjSGA_024860.1
I
0.750
Bra018490
Brassica rapa
Bra018490
I
0.729
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.729
Bo2g104810
Brassica oleracea
Bo2g104810
I
0.708
Bo9g078450
Brassica oleracea
Bo9g078450
I
0.708
Bra029469
Brassica rapa
Bra029469
I
0.708
MTR_1g077390
Medicago truncatula
MTR_1g077390
N
0.708
MTR_1g090783
Medicago truncatula
MTR_1g090783
N
0.708
Ca_08369
Cicer arietinum
Ca_08369
N
0.708
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.708
Bostr.2570s0082
Boechera stricta
Bostr.2570s0082
I
0.708
Cagra.1772s0003
Capsella grandiflora
Cagra.1772s0003
I
0.708
Carubv10014232m.g
Capsella rubella
Carubv10014232m.g
I
0.708
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.708
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.708
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.708