TCM_042848 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_042848 T256487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY18262 MADS box 10 58

Links

Other MADS box family TFs
Other Theobroma cacao TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_042799 Theobroma cacao TCM_042799 I 0.917
TCM_025671 Theobroma cacao TCM_025671 I 0.830
TCM_025670 Theobroma cacao TCM_025670 I 0.792
TCM_026845 Theobroma cacao TCM_026845 I 0.792
30128.m008984 Ricinus communis 30128.m008984 I 0.792
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.771
LjSGA_104570.1 Lotus japonicus LjSGA_104570.1 I 0.759
TCM_026842 Theobroma cacao TCM_026842 I 0.750
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.745
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.733
Pm004396 Prunus mume Pm004396 I 0.733
TCM_025676 Theobroma cacao TCM_025676 N 0.729
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.729
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.729
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.729
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.729
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
mgf026186m Mimulus guttatus mgf026186m I 0.727
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.727
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.717
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.717
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.711
Ca_13275 Cicer arietinum Ca_13275 I 0.711
Cla005226 Citrullus lanatus Cla005226 I 0.711
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.711
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.708
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.708