evm.TU.contig_43908 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_43908 T258133_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_43908.1 MADS box 1 27

Links

Other MADS box family TFs
Other Carica papaya TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_24864.2 Carica papaya evm.TU.contig_24864.2 N 1.000
evm.TU.contig_28448.2 Carica papaya evm.TU.contig_28448.2 N 1.000
evm.TU.supercontig_185.4 Carica papaya evm.TU.supercontig_185.4 N 1.000
evm.TU.contig_25253.3 Carica papaya evm.TU.contig_25253.3 N 0.960
evm.TU.contig_35795 Carica papaya evm.TU.contig_35795 N 0.960
evm.TU.supercontig_1136.1 Carica papaya evm.TU.supercontig_1136.1 N 0.960
evm.TU.contig_35890 Carica papaya evm.TU.contig_35890 N 0.920
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.760
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.760
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.760
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.760
MDP0000925348 Malus domestica MDP0000925348 I 0.760
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.720
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.720
evm.TU.contig_25253.5 Carica papaya evm.TU.contig_25253.5 I 0.720
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I 0.720
evm.TU.supercontig_135.3 Carica papaya evm.TU.supercontig_135.3 N 0.720
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I 0.720
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.720