evm.TU.supercontig_43.109 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_43.109 T258250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_43.109 MADS box 12 62

Links

Other MADS box family TFs
Other Carica papaya TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
BGIOSGA001578 Oryza indica BGIOSGA001578 I
BGIOSGA002597 Oryza indica BGIOSGA002597 I
BGIOSGA014034 Oryza indica BGIOSGA014034 I
BGIOSGA022116 Oryza indica BGIOSGA022116 N
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BGIOSGA027623 Oryza indica BGIOSGA027623 I
BGIOSGA031230 Oryza indica BGIOSGA031230 I
Bo5g002810 Brassica oleracea Bo5g002810 I
Bo5g002850 Brassica oleracea Bo5g002850 I
Bo9g004070 Brassica oleracea Bo9g004070 I
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
Bra036328 Brassica rapa Bra036328 I
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Carubv10000489m.g Capsella rubella Carubv10000489m.g I
Carubv10003260m.g Capsella rubella Carubv10003260m.g I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
Carubv10009451m.g Capsella rubella Carubv10009451m.g I
Ca_04069 Cicer arietinum Ca_04069 I
Ca_20988 Cicer arietinum Ca_20988 I
Ca_27204 Cicer arietinum Ca_27204 I
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I
Cla011742 Citrullus lanatus Cla011742 I
Eucgr.I02571 Eucalyptus grandis Eucgr.I02571 N
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
F775_13961 Aegilops tauschii F775_13961 I
F775_20638 Aegilops tauschii F775_20638 I
F775_30082 Aegilops tauschii F775_30082 I
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I
gene23394-v1.0-hybrid Fragaria vesca gene23394-v1.0-hybrid N
GLYMA12G31211 Glycine max GLYMA12G31211 I
GLYMA14G36840 Glycine max GLYMA14G36840 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Gorai.006G113700 Gossypium raimondii Gorai.006G113700 N
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N
GRMZM2G003715 Zea mays GRMZM2G003715 I
GRMZM2G052239 Zea mays GRMZM2G052239 I
GRMZM2G139700 Zea mays GRMZM2G139700 I
GRMZM2G163914 Zea mays GRMZM2G163914 N
GRMZM2G459156 Zea mays GRMZM2G459156 N
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I
LPERR06G00060 Leersia perrieri LPERR06G00060 N
LPERR08G03510 Leersia perrieri LPERR08G03510 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
LPERR09G14720 Leersia perrieri LPERR09G14720 I
LPERR11G01300 Leersia perrieri LPERR11G01300 I
LPERR12G01440 Leersia perrieri LPERR12G01440 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
MDP0000133636 Malus domestica MDP0000133636 N
MDP0000214515 Malus domestica MDP0000214515 I
MDP0000282616 Malus domestica MDP0000282616 I
MDP0000575835 Malus domestica MDP0000575835 I
MDP0000907489 Malus domestica MDP0000907489 N
mgf015836m Mimulus guttatus mgf015836m I
mgf022344m Mimulus guttatus mgf022344m I
MLOC_13932 Hordeum vulgare MLOC_13932 I
MLOC_37843 Hordeum vulgare MLOC_37843 I
MLOC_50406 Hordeum vulgare MLOC_50406 I
MLOC_65286 Hordeum vulgare MLOC_65286 I
MLOC_75297 Hordeum vulgare MLOC_75297 N
MTR_3g093050 Medicago truncatula MTR_3g093050 I
MTR_5g069030 Medicago truncatula MTR_5g069030 I
MTR_8g023840 Medicago truncatula MTR_8g023840 I
MTR_8g023860 Medicago truncatula MTR_8g023860 I
MTR_8g023930 Medicago truncatula MTR_8g023930 I
NAC026 Arabidopsis thaliana AT1G62700 I
NAC69 Arabidopsis thaliana AT4G01550 D
OB01G10300 Oryza brachyantha OB01G10300 I
OB08G13730 Oryza brachyantha OB08G13730 I
OB09G25590 Oryza brachyantha OB09G25590 I
OBART01G00360 Oryza barthii OBART01G00360 I
OBART01G16620 Oryza barthii OBART01G16620 I
OBART06G00060 Oryza barthii OBART06G00060 N
OBART08G03460 Oryza barthii OBART08G03460 I
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I
OLONG_000105 Oryza longistaminata OLONG_000105 I
OLONG_004904 Oryza longistaminata OLONG_004904 N
OLONG_022415 Oryza longistaminata OLONG_022415 I
OMERI01G15210 Oryza meridionalis OMERI01G15210 I
OMERI01G15230 Oryza meridionalis OMERI01G15230 I
OMERI04G25730 Oryza meridionalis OMERI04G25730 I
OMERI06G00050 Oryza meridionalis OMERI06G00050 N
OMERI08G03500 Oryza meridionalis OMERI08G03500 I
OMERI09G14170 Oryza meridionalis OMERI09G14170 I
ONIVA01G00280 Oryza nivara ONIVA01G00280 I
ONIVA01G18370 Oryza nivara ONIVA01G18370 I
ONIVA04G29890 Oryza nivara ONIVA04G29890 I
ONIVA06G00080 Oryza nivara ONIVA06G00080 N
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
ONIVA09G20130 Oryza nivara ONIVA09G20130 I
OPUNC01G00320 Oryza punctata OPUNC01G00320 I
OPUNC04G28220 Oryza punctata OPUNC04G28220 I
OPUNC06G00030 Oryza punctata OPUNC06G00030 N
OPUNC08G03310 Oryza punctata OPUNC08G03310 I
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
OS01G0104500 Oryza sativa OS01G0104500 I
OS01G0393100 Oryza sativa OS01G0393100 I
OS04G0691300 Oryza sativa OS04G0691300 I
OS06G0101800 Oryza sativa OS06G0101800 N
OS08G0157900 Oryza sativa OS08G0157900 I
OS08G0511200 Oryza sativa OS08G0511200 I
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I
Pm018442 Prunus mume Pm018442 N
Pm019659 Prunus mume Pm019659 I
Pm028711 Prunus mume Pm028711 I
Pm028712 Prunus mume Pm028712 N
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
PRUPE_ppa008321mg Prunus persica PRUPE_ppa008321mg N
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I
PRUPE_ppa023197mg Prunus persica PRUPE_ppa023197mg N
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I
Sb02g032230 Sorghum bicolor Sb02g032230 I
Sb07g003900 Sorghum bicolor Sb07g003900 I
Sb10g000101 Sorghum bicolor Sb10g000101 N
Si006105m.g Setaria italica Si006105m.g N
Si022723m.g Setaria italica Si022723m.g I
Si032702m.g Setaria italica Si032702m.g I
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I
TCM_015535 Theobroma cacao TCM_015535 I
TCM_041332 Theobroma cacao TCM_041332 N
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
Traes_7AS_A6C843545 Triticum aestivum Traes_7AS_A6C843545 N
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_32613 Triticum urartu TRIUR3_32613 I
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I