evm.TU.supercontig_505.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_505.1 T258256_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_505.1 MADS box 1 47
evm.model.supercontig_505.1 MADS box 90 111

Links

Other MADS box family TFs
Other Carica papaya TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_025760 Albugo laibachii ALNC14_025760 N
ALNC14_062880 Albugo laibachii ALNC14_062880 N
F443_03605 Phytophthora parasitica F443_03605 N
F443_22283 Phytophthora parasitica F443_22283 N
fgenesh_scip_prom.28083.2334 Phytophthora lateralis fgenesh_scip_prom.28083.2334 N
fgenesh_scip_prom.46568.10526 Phytophthora kernoviae fgenesh_scip_prom.46568.10526 N
fgenesh_scip_prom.46568.8774 Phytophthora kernoviae fgenesh_scip_prom.46568.8774 N
maker-pag1_scaffold_13-snap-gene-0.57 Pythium aphanidermatum maker-pag1_scaffold_13-snap-gene-0.57 N
maker-par_contig_2147-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2147-snap-gene-0.2 N
maker-par_contig_3704-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_3704-snap-gene-0.1 N
maker-pir_contig_19-fgenesh-gene-0.28 Pythium irregulare maker-pir_contig_19-fgenesh-gene-0.28 N
maker-pir_contig_979-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_979-fgenesh-gene-0.1 N
maker-pve_contig_1-fgenesh-gene-0.24 Pythium vexans maker-pve_contig_1-fgenesh-gene-0.24 N
Phyra81265 Phytophthora ramorum Phyra81265 N
Phyra81953 Phytophthora ramorum Phyra81953 N
Physo128820 Phytophthora sojae Physo128820 N
Physo138182 Phytophthora sojae Physo138182 N
PITG_07958 Phytophthora infestans PITG_07958 N
PITG_16804 Phytophthora infestans PITG_16804 N
PYU1_G009526 Pythium ultimum PYU1_G009526 N
PYU1_G011168 Pythium ultimum PYU1_G011168 N
snap_masked-pag1_scaffold_43-abinit-gene-0.96 Pythium aphanidermatum snap_masked-pag1_scaffold_43-abinit-gene-0.96 N
SPRG_04135 Saprolegnia parasitica SPRG_04135 N