CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_13-snap-gene-0.57
(
Pythium aphanidermatum
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
maker-pag1_scaffold_13-snap-gene-0.57
T320474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000013795
RWP-RK
58
105
CNFEAFSLHFHLPLKAAAEKFGVRATAFKKRCRAIGIRHWPYRKVRSL
Links
Other
RWP-RK
family TFs
Other
Pythium aphanidermatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.2334
Phytophthora lateralis
fgenesh_scip_prom.28083.2334
N
1.000
maker-par_contig_2147-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_2147-snap-gene-0.2
N
1.000
Phyra81265
Phytophthora ramorum
Phyra81265
N
1.000
PYU1_G011168
Pythium ultimum
PYU1_G011168
N
1.000
SPRG_04135
Saprolegnia parasitica
SPRG_04135
N
0.979
F443_03605
Phytophthora parasitica
F443_03605
N
0.979
fgenesh_scip_prom.46568.10526
Phytophthora kernoviae
fgenesh_scip_prom.46568.10526
N
0.979
maker-pir_contig_979-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_979-fgenesh-gene-0.1
N
0.979
Physo138182
Phytophthora sojae
Physo138182
N
0.979
PITG_07958
Phytophthora infestans
PITG_07958
N
0.979
ALNC14_025760
Albugo laibachii
ALNC14_025760
N
0.938
ALNC14_062880
Albugo laibachii
ALNC14_062880
N
0.938
maker-pir_contig_19-fgenesh-gene-0.28
Pythium irregulare
maker-pir_contig_19-fgenesh-gene-0.28
N
0.938
snap_masked-pag1_scaffold_43-abinit-gene-0.96
Pythium aphanidermatum
snap_masked-pag1_scaffold_43-abinit-gene-0.96
N
0.938
F443_22283
Phytophthora parasitica
F443_22283
N
0.917
fgenesh_scip_prom.46568.8774
Phytophthora kernoviae
fgenesh_scip_prom.46568.8774
N
0.917
maker-par_contig_3704-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_3704-snap-gene-0.1
N
0.917
maker-pve_contig_1-fgenesh-gene-0.24
Pythium vexans
maker-pve_contig_1-fgenesh-gene-0.24
N
0.917
Phyra81953
Phytophthora ramorum
Phyra81953
N
0.917
Physo128820
Phytophthora sojae
Physo128820
N
0.917
PITG_16804
Phytophthora infestans
PITG_16804
N
0.917
PYU1_G009526
Pythium ultimum
PYU1_G009526
N
0.896
HpaG809313
Hyaloperonospora arabidopsidis
HpaG809313
N
0.878