gene18029-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene18029-v1.0-hybrid T258341_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.812 0.812
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18029.1-v1.0-hybrid MADS box 10 58

Links

Other MADS box family TFs
Other Fragaria vesca TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001097 Aedes aegypti AAEL001097 N 0.000
AALB007245 Anopheles albimanus AALB007245 N 0.000
AARA004759 Anopheles arabiensis AARA004759 N 0.000
ACHR003335 Anopheles christyi ACHR003335 N 0.000
ADAC009825 Anopheles darlingi ADAC009825 N 0.000
AFUN007768 Anopheles funestus AFUN007768 N 0.000
AMIN003177 Anopheles minimus AMIN003177 N 0.000
ASTEI00494 Anopheles stephensi ASTEI00494 N 0.000
CPIJ003682 Culex quinquefasciatus CPIJ003682 N 0.000
CpipJ_CPIJ003682 Culex pipiens CpipJ_CPIJ003682 N 0.000