Gorai.004G229700 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.004G229700 T258400_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G229700.1 MADS box 10 56

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003375 Calypte anna Aan_R003375 N 0.000
Aan_R005281 Calypte anna Aan_R005281 N 0.000
Aan_R015818 Calypte anna Aan_R015818 N 0.000
Afo_R009642 Aptenodytes forsteri Afo_R009642 N 0.000
Afo_R016009 Aptenodytes forsteri Afo_R016009 N 0.000
Alligator_sinensis_CCG001718.1 Alligator sinensis Alligator_sinensis_CCG001718.1 N 0.000
Alligator_sinensis_CCG003320.1 Alligator sinensis Alligator_sinensis_CCG003320.1 N 0.000
Alligator_sinensis_CCG006442.1 Alligator sinensis Alligator_sinensis_CCG006442.1 N 0.000
Brh_R007234 Buceros rhinoceros Brh_R007234 N 0.000
Brh_R013079 Buceros rhinoceros Brh_R013079 N 0.000
Brh_R013831 Buceros rhinoceros Brh_R013831 N 0.000
Cmyd_10014727 Chelonia mydas Cmyd_10014727 N 0.000
Cmyd_10017465 Chelonia mydas Cmyd_10017465 N 0.000
ENSAMEG00000009733 Ailuropoda melanoleuca ENSAMEG00000009733 N 0.000
ENSAMEG00000013234 Ailuropoda melanoleuca ENSAMEG00000013234 N 0.000
ENSAMEG00000018999 Ailuropoda melanoleuca ENSAMEG00000018999 N 0.000
ENSAMXG00000001175 Astyanax mexicanus ENSAMXG00000001175 N 0.000
ENSAMXG00000006284 Astyanax mexicanus ENSAMXG00000006284 N 0.000
ENSAPLG00000011554 Anas platyrhynchos ENSAPLG00000011554 N 0.000
ENSAPLG00000011634 Anas platyrhynchos ENSAPLG00000011634 N 0.000
ENSAPLG00000015100 Anas platyrhynchos ENSAPLG00000015100 N 0.000
ENSBTAP00000033821-D1 Bos grunniens ENSBTAP00000033821-D1 N 0.000
ENSCSAG00000018510 Chlorocebus sabaeus ENSCSAG00000018510 N 0.000
ENSCSAG00000018744 Chlorocebus sabaeus ENSCSAG00000018744 N 0.000
ENSCSAG00000019504 Chlorocebus sabaeus ENSCSAG00000019504 N 0.000
ENSDORG00000015686 Dipodomys ordii ENSDORG00000015686 N 0.000
ENSFALG00000004672 Ficedula albicollis ENSFALG00000004672 N 0.000
ENSFALG00000013173 Ficedula albicollis ENSFALG00000013173 N 0.000
ENSFALG00000014186 Ficedula albicollis ENSFALG00000014186 N 0.000
ENSGMOG00000000298 Gadus morhua ENSGMOG00000000298 N 0.000
ENSLACG00000011012 Latimeria chalumnae ENSLACG00000011012 N 0.000
ENSLACG00000012913 Latimeria chalumnae ENSLACG00000012913 N 0.000
ENSLACG00000015505 Latimeria chalumnae ENSLACG00000015505 N 0.000
ENSLOCG00000002451 Lepisosteus oculatus ENSLOCG00000002451 N 0.000
ENSLOCG00000005747 Lepisosteus oculatus ENSLOCG00000005747 N 0.000
ENSMEUG00000008737 Macropus eugenii ENSMEUG00000008737 N 0.000
ENSMICG00000004609 Microcebus murinus ENSMICG00000004609 N 0.000
ENSMPUG00000007986 Mustela putorius furo ENSMPUG00000007986 N 0.000
ENSMPUG00000020171 Mustela putorius furo ENSMPUG00000020171 N 0.000
ENSNLEG00000007016 Nomascus leucogenys ENSNLEG00000007016 N 0.000
ENSNLEG00000007608 Nomascus leucogenys ENSNLEG00000007608 N 0.000
ENSNLEG00000018459 Nomascus leucogenys ENSNLEG00000018459 N 0.000
ENSOARG00000004125 Ovis aries ENSOARG00000004125 N 0.000
ENSOARG00000004555 Ovis aries ENSOARG00000004555 N 0.000
ENSOARG00000014918 Ovis aries ENSOARG00000014918 N 0.000
ENSONIG00000003518 Oreochromis niloticus ENSONIG00000003518 N 0.000
ENSONIG00000010423 Oreochromis niloticus ENSONIG00000010423 N 0.000
ENSONIG00000016558 Oreochromis niloticus ENSONIG00000016558 N 0.000
ENSORLG00000016193 Oryzias latipes ENSORLG00000016193 N 0.000
ENSP00000240587 Macaca fascicularis ENSP00000240587 N 0.000
ENSP00000240587-D1 Bos grunniens ENSP00000240587-D1 N 0.000
ENSP00000240587-D2 Bos grunniens ENSP00000240587-D2 N 0.000
ENSP00000323584 Macaca fascicularis ENSP00000323584 N 0.000
ENSP00000360552 Macaca fascicularis ENSP00000360552 N 0.000
ENSPANG00000000181 Papio anubis ENSPANG00000000181 N 0.000
ENSPANG00000001076 Papio anubis ENSPANG00000001076 N 0.000
ENSPANG00000003945 Papio anubis ENSPANG00000003945 N 0.000
ENSPFOG00000001207 Poecilia formosa ENSPFOG00000001207 N 0.000
ENSPFOG00000003829 Poecilia formosa ENSPFOG00000003829 N 0.000
ENSPFOG00000005562 Poecilia formosa ENSPFOG00000005562 N 0.000
ENSPFOG00000020779 Poecilia formosa ENSPFOG00000020779 N 0.000
ENSPPYG00000009248 Pongo abelii ENSPPYG00000009248 N 0.000
ENSPPYG00000009813 Pongo abelii ENSPPYG00000009813 N 0.000
ENSPSIG00000007188 Pelodiscus sinensis ENSPSIG00000007188 N 0.000
ENSPSIG00000007559 Pelodiscus sinensis ENSPSIG00000007559 N 0.000
ENSSHAG00000006124 Sarcophilus harrisii ENSSHAG00000006124 N 0.000
ENSSHAG00000015362 Sarcophilus harrisii ENSSHAG00000015362 N 0.000
ENSSSCG00000007482 Sus scrofa ENSSSCG00000007482 N 0.000
ENSSTOG00000008373 Ictidomys tridecemlineatus ENSSTOG00000008373 N 0.000
ENSSTOG00000019384 Ictidomys tridecemlineatus ENSSTOG00000019384 N 0.000
ENSSTOG00000024242 Ictidomys tridecemlineatus ENSSTOG00000024242 N 0.000
ENSTNIG00000008370 Tetraodon nigroviridis ENSTNIG00000008370 N 0.000
ENSTRUG00000006028 Takifugu rubripes ENSTRUG00000006028 N 0.000
ENSTSYG00000005762 Tarsius syrichta ENSTSYG00000005762 N 0.000
ENSXMAG00000000992 Xiphophorus maculatus ENSXMAG00000000992 N 0.000
ENSXMAG00000012685 Xiphophorus maculatus ENSXMAG00000012685 N 0.000
ENSXMAG00000019156 Xiphophorus maculatus ENSXMAG00000019156 N 0.000
Gfo_R006219 Geospiza fortis Gfo_R006219 N 0.000
Gfo_R009586 Geospiza fortis Gfo_R009586 N 0.000
Gfo_R015098 Geospiza fortis Gfo_R015098 N 0.000
Myotis_brandtii_TSHZ1_10034198 Myotis brandtii Myotis_brandtii_TSHZ1_10034198 N 0.000
Myotis_brandtii_TSHZ2_10026337 Myotis brandtii Myotis_brandtii_TSHZ2_10026337 N 0.000
Myotis_brandtii_TSHZ3_10009571 Myotis brandtii Myotis_brandtii_TSHZ3_10009571 N 0.000
Ogr08975 Ophisaurus gracilis Ogr08975 N 0.000
Ogr09581 Ophisaurus gracilis Ogr09581 N 0.000
Ogr14572 Ophisaurus gracilis Ogr14572 N 0.000
Pvit_03347 Pogona vitticeps Pvit_03347 N 0.000
Pvit_07582 Pogona vitticeps Pvit_07582 N 0.000
Pvit_14639 Pogona vitticeps Pvit_14639 N 0.000
Tal_R000655 Tyto alba Tal_R000655 N 0.000
Tal_R010116 Tyto alba Tal_R010116 N 0.000
Tal_R012305 Tyto alba Tal_R012305 N 0.000
TSHZ1 Anolis carolinensis ENSACAG00000005329 N 0.000
TSHZ1 Bos taurus ENSBTAG00000000422 N 0.000
TSHZ1 Canis familiaris ENSCAFG00000000020 N 0.000
TSHZ1 Callithrix jacchus ENSCJAG00000003224 N 0.000
TSHZ1 Cavia porcellus ENSCPOG00000009072 N 0.000
TSHZ1 Dasypus novemcinctus ENSDNOG00000033317 N 0.000
TSHZ1 Equus caballus ENSECAG00000002955 N 0.000
TSHZ1 Erinaceus europaeus ENSEEUG00000001038 N 0.000
TSHZ1 Echinops telfairi ENSETEG00000004530 N 0.000
TSHZ1 Felis catus ENSFCAG00000027348 N 0.000
TSHZ1 Homo sapiens ENSG00000179981 N 0.000
TSHZ1 Gallus gallus ENSGALG00000013672 N 0.000
TSHZ1 Loxodonta africana ENSLAFG00000027654 N 0.000
TSHZ1 Meleagris gallopavo ENSMGAG00000008114 N 0.000
TSHZ1 Microcebus murinus ENSMICG00000013601 N 0.000
TSHZ1 Myotis lucifugus ENSMLUG00000000305 N 0.000
TSHZ1 Macaca mulatta ENSMMUG00000014916 N 0.000
TSHZ1 Monodelphis domestica ENSMODG00000012317 N 0.000
Tshz1 Mus musculus ENSMUSG00000046982 N 0.000
TSHZ1 Ornithorhynchus anatinus ENSOANG00000001135 N 0.000
TSHZ1 Oryctolagus cuniculus ENSOCUG00000008235 N 0.000
TSHZ1 Otolemur garnettii ENSOGAG00000007341 N 0.000
TSHZ1 Procavia capensis ENSPCAG00000013873 N 0.000
TSHZ1 Pan troglodytes ENSPTRG00000010120 N 0.000
Tshz1 Rattus norvegicus ENSRNOG00000016246 N 0.000
TSHZ1 Sus scrofa ENSSSCG00000004861 N 0.000
TSHZ1 Taeniopygia guttata ENSTGUG00000009111 N 0.000
TSHZ1 Tursiops truncatus ENSTTRG00000017219 N 0.000
tshz1.L Xenopus laevis XB-GENE-6461981 N 0.000
tshz1.S Xenopus laevis XB-GENE-6465500 N 0.000
TSHZ2 Anolis carolinensis ENSACAG00000012691 N 0.000
TSHZ2 Bos taurus ENSBTAG00000007917 N 0.000
TSHZ2 Canis familiaris ENSCAFG00000011808 N 0.000
TSHZ2 Callithrix jacchus ENSCJAG00000000609 N 0.000
TSHZ2 Cavia porcellus ENSCPOG00000002986 N 0.000
tshz2 Danio rerio ENSDARG00000079201 N 0.000
TSHZ2 Dasypus novemcinctus ENSDNOG00000034743 N 0.000
TSHZ2 Erinaceus europaeus ENSEEUG00000000596 N 0.000
TSHZ2 Echinops telfairi ENSETEG00000011541 N 0.000
TSHZ2 Felis catus ENSFCAG00000014616 N 0.000
TSHZ2 Homo sapiens ENSG00000182463 N 0.000
TSHZ2 Gallus gallus ENSGALG00000007809 N 0.000
TSHZ2 Gorilla gorilla ENSGGOG00000005282 N 0.000
TSHZ2 Loxodonta africana ENSLAFG00000002942 N 0.000
TSHZ2 Meleagris gallopavo ENSMGAG00000015562 N 0.000
TSHZ2 Myotis lucifugus ENSMLUG00000013960 N 0.000
TSHZ2 Macaca mulatta ENSMMUG00000013035 N 0.000
TSHZ2 Monodelphis domestica ENSMODG00000016391 N 0.000
Tshz2 Mus musculus ENSMUSG00000047907 N 0.000
TSHZ2 Ornithorhynchus anatinus ENSOANG00000003138 N 0.000
TSHZ2 Oryctolagus cuniculus ENSOCUG00000002587 N 0.000
TSHZ2 Otolemur garnettii ENSOGAG00000008544 N 0.000
tshz2 Oryzias latipes ENSORLG00000016111 N 0.000
TSHZ2 Pan troglodytes ENSPTRG00000013634 N 0.000
TSHZ2 Pteropus vampyrus ENSPVAG00000001894 N 0.000
Tshz2 Rattus norvegicus ENSRNOG00000048433 N 0.000
TSHZ2 Tupaia belangeri ENSTBEG00000015472 N 0.000
TSHZ2 Taeniopygia guttata ENSTGUG00000008551 N 0.000
tshz2 Tetraodon nigroviridis ENSTNIG00000012458 N 0.000
tshz2 Takifugu rubripes ENSTRUG00000007670 N 0.000
TSHZ2 Tursiops truncatus ENSTTRG00000005801 N 0.000
TSHZ2 Vicugna pacos ENSVPAG00000009638 N 0.000
tshz2 Xenopus tropicalis XB-GENE-486894 N 0.000
TSHZ3 Anolis carolinensis ENSACAG00000012280 N 0.000
TSHZ3 Bos taurus ENSBTAG00000002687 N 0.000
TSHZ3 Canis familiaris ENSCAFG00000007592 N 0.000
TSHZ3 Callithrix jacchus ENSCJAG00000018374 N 0.000
TSHZ3 Cavia porcellus ENSCPOG00000003591 N 0.000
TSHZ3 Dasypus novemcinctus ENSDNOG00000013222 N 0.000
TSHZ3 Equus caballus ENSECAG00000016274 N 0.000
TSHZ3 Erinaceus europaeus ENSEEUG00000004335 N 0.000
TSHZ3 Felis catus ENSFCAG00000004896 N 0.000
TSHZ3 Homo sapiens ENSG00000121297 N 0.000
TSHZ3 Gallus gallus ENSGALG00000004528 N 0.000
TSHZ3 Gorilla gorilla ENSGGOG00000003676 N 0.000
TSHZ3 Loxodonta africana ENSLAFG00000000905 N 0.000
TSHZ3 Meleagris gallopavo ENSMGAG00000015601 N 0.000
TSHZ3 Myotis lucifugus ENSMLUG00000029075 N 0.000
TSHZ3 Macaca mulatta ENSMMUG00000014028 N 0.000
TSHZ3 Monodelphis domestica ENSMODG00000012390 N 0.000
Tshz3 Mus musculus ENSMUSG00000021217 N 0.000
TSHZ3 Ornithorhynchus anatinus ENSOANG00000002785 N 0.000
TSHZ3 Oryctolagus cuniculus ENSOCUG00000015902 N 0.000
TSHZ3 Otolemur garnettii ENSOGAG00000032636 N 0.000
TSHZ3 Ochotona princeps ENSOPRG00000010680 N 0.000
TSHZ3 Procavia capensis ENSPCAG00000011413 N 0.000
TSHZ3 Pan troglodytes ENSPTRG00000010788 N 0.000
Tshz3 Rattus norvegicus ENSRNOG00000013938 N 0.000
TSHZ3 Sus scrofa ENSSSCG00000025214 N 0.000
TSHZ3 Taeniopygia guttata ENSTGUG00000009016 N 0.000
TSHZ3 Tursiops truncatus ENSTTRG00000007910 N 0.000
tshz3.L Xenopus laevis XB-GENE-866446 N 0.000
tshz3b Danio rerio ENSDARG00000103361 N 0.000
tshz3b Oryzias latipes ENSORLG00000015489 N 0.000
tshz3b Tetraodon nigroviridis ENSTNIG00000004737 N 0.000
tshz3b Takifugu rubripes ENSTRUG00000005330 N 0.000
XP_002934421 Xenopus tropicalis XP_002934421 N 0.000