Gorai.013G155300 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.013G155300 T258506_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G155300.1 MADS box 1 39

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29904.m002956 Ricinus communis 29904.m002956 N 0.000
30054.m000819 Ricinus communis 30054.m000819 N 0.000
30128.m008737 Ricinus communis 30128.m008737 N 0.000
AMTR_s00001p00272070 Amborella trichopoda AMTR_s00001p00272070 N 0.000
AMTR_s00008p00198780 Amborella trichopoda AMTR_s00008p00198780 N 0.000
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.000
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.000
Aquca_010_00112 Aquilegia coerulea Aquca_010_00112 N 0.000
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.000
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.000
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.000
BGIOSGA026779 Oryza indica BGIOSGA026779 N 0.000
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.000
BHLH96 Arabidopsis thaliana AT1G72210 N 0.000
Bo1g101110 Brassica oleracea Bo1g101110 N 0.000
Bo3g082010 Brassica oleracea Bo3g082010 N 0.000
Bo5g038570 Brassica oleracea Bo5g038570 N 0.000
Bo6g092570 Brassica oleracea Bo6g092570 N 0.000
Bo7g037540 Brassica oleracea Bo7g037540 N 0.000
Bo7g057920 Brassica oleracea Bo7g057920 N 0.000
Bo8g071490 Brassica oleracea Bo8g071490 N 0.000
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.000
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.000
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.000
Bra001929 Brassica rapa Bra001929 N 0.000
Bra003886 Brassica rapa Bra003886 N 0.000
Bra012329 Brassica rapa Bra012329 N 0.000
Bra016080 Brassica rapa Bra016080 N 0.000
Bra016377 Brassica rapa Bra016377 N 0.000
Bra028357 Brassica rapa Bra028357 N 0.000
Bra040856 Brassica rapa Bra040856 N 0.000
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.000
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.000
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.000
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.000
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.000
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.000
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.000
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.000
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.000
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.000
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.000
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.000
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.000
Ca_01181 Cicer arietinum Ca_01181 N 0.000
Ca_12363 Cicer arietinum Ca_12363 N 0.000
Ca_16010 Cicer arietinum Ca_16010 N 0.000
Ca_28086 Cicer arietinum Ca_28086 N 0.000
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.000
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.000
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.000
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.000
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.000
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.000
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.000
Cla005338 Citrullus lanatus Cla005338 N 0.000
Cla020173 Citrullus lanatus Cla020173 N 0.000
Cla021744 Citrullus lanatus Cla021744 N 0.000
Cla022458 Citrullus lanatus Cla022458 N 0.000
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.000
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.000
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.000
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.000
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.000
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.000
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.000
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.000
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.000
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.000
FAMA Arabidopsis thaliana AT3G24140 N 0.000
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.000
FMA Arabidopsis lyrata scaffold_302925.1 N 0.000
FMA Vitis vinifera VIT_05s0029g00050 N 0.000
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.000
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.000
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.000
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.000
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.000
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.000
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.000
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.000
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.000
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.000
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.000
GLYMA10G29760 Glycine max GLYMA10G29760 N 0.000
GLYMA13G08740 Glycine max GLYMA13G08740 N 0.000
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.000
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.000
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.000
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.000
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.000
Gorai.009G233000 Gossypium raimondii Gorai.009G233000 N 0.000
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.000
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.000
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.000
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.000
GSMUA_Achr5G05450_001 Musa acuminata GSMUA_Achr5G05450_001 N 0.000
GSMUA_Achr5G17900_001 Musa acuminata GSMUA_Achr5G17900_001 N 0.000
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.000
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.000
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.000
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.000
LPERR08G15350 Leersia perrieri LPERR08G15350 N 0.000
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.000
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.000
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.000
MDP0000229007 Malus domestica MDP0000229007 N 0.000
MDP0000267178 Malus domestica MDP0000267178 N 0.000
MDP0000646823 Malus domestica MDP0000646823 N 0.000
MDP0000672131 Malus domestica MDP0000672131 N 0.000
MDP0000944210 Malus domestica MDP0000944210 N 0.000
mgf015694m Mimulus guttatus mgf015694m N 0.000
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.000
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.000
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.000
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.000
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.000
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.000
OB08G25610 Oryza brachyantha OB08G25610 N 0.000
OB09G19960 Oryza brachyantha OB09G19960 N 0.000
OBART03G06470 Oryza barthii OBART03G06470 N 0.000
OBART08G18480 Oryza barthii OBART08G18480 N 0.000
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.000
OGLUM08G19420 Oryza glumaepatula OGLUM08G19420 N 0.000
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.000
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.000
OMERI08G14480 Oryza meridionalis OMERI08G14480 N 0.000
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.000
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.000
ONIVA08G20580 Oryza nivara ONIVA08G20580 N 0.000
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.000
OPUNC08G16410 Oryza punctata OPUNC08G16410 N 0.000
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.000
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.000
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.000
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.000
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.000
ORGLA08G0160400 Oryza glaberrima ORGLA08G0160400 N 0.000
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.000
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.000
ORUFI08G20670 Oryza rufipogon ORUFI08G20670 N 0.000
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.000
OS03G0188400 Oryza sativa OS03G0188400 N 0.000
OS09G0468700 Oryza sativa OS09G0468700 N 0.000
Pavir.Ba01963 Panicum virgatum Pavir.Ba01963 N 0.000
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.000
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N 0.000
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.000
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.000
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.000
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.000
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.000
PK04856.1 Cannabis sativa PK04856.1 N 0.000
PK14736.1 Cannabis sativa PK14736.1 N 0.000
PK18533.1 Cannabis sativa PK18533.1 N 0.000
PK21294.1 Cannabis sativa PK21294.1 N 0.000
PK28391.1 Cannabis sativa PK28391.1 N 0.000
Pm002111 Prunus mume Pm002111 N 0.000
Pm003380 Prunus mume Pm003380 N 0.000
Pm004489 Prunus mume Pm004489 N 0.000
Pm009474 Prunus mume Pm009474 N 0.000
Pm023207 Prunus mume Pm023207 N 0.000
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.000
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.000
POPTR_0003s09200 Populus trichocarpa POPTR_0003s09200 N 0.000
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.000
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.000
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.000
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.000
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.000
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.000
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.000
PRUPE_ppa020862mg Prunus persica PRUPE_ppa020862mg N 0.000
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.000
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.000
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.000
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.000
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.000
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.000
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.000
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.000
Si013925m.g Setaria italica Si013925m.g N 0.000
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.000
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.000
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.000
TCM_015694 Theobroma cacao TCM_015694 N 0.000
TCM_020336 Theobroma cacao TCM_020336 N 0.000
TCM_026599 Theobroma cacao TCM_026599 N 0.000
TCM_034439 Theobroma cacao TCM_034439 N 0.000
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.000
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.000
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.000
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.000
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.000
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.000
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.000
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.000