Lus10003123.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10003123.g T258522_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003123 MADS box 10 57

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007333 Oryza indica BGIOSGA007333 I 0.729
BGIOSGA007336 Oryza indica BGIOSGA007336 I 0.729
BGIOSGA029053 Oryza indica BGIOSGA029053 I 0.708
Bo1g040180 Brassica oleracea Bo1g040180 I 0.708
Bo7g110310 Brassica oleracea Bo7g110310 I 0.708
Bo8g050720 Brassica oleracea Bo8g050720 I 0.729
Bostr.7867s0353 Boechera stricta Bostr.7867s0353 I 0.708
Bra010465 Brassica rapa Bra010465 I 0.708
Bra013891 Brassica rapa Bra013891 I 0.708
BRADI1G77020 Brachypodium distachyon BRADI1G77020 I 0.729
BRADI3G32090 Brachypodium distachyon BRADI3G32090 I 0.708
BRADI3G41297 Brachypodium distachyon BRADI3G41297 I 0.729
Cagra.2248s0020 Capsella grandiflora Cagra.2248s0020 I 0.708
cassava15798.m1 Manihot esculenta cassava15798.m1 I 0.708
Eucgr.H04618 Eucalyptus grandis Eucgr.H04618 I 0.708
F775_00385 Aegilops tauschii F775_00385 I 0.708
F775_08627 Aegilops tauschii F775_08627 I 0.708
F775_23758 Aegilops tauschii F775_23758 I 0.708
F775_29801 Aegilops tauschii F775_29801 I 0.708
GSMUA_Achr11G02790_001 Musa acuminata GSMUA_Achr11G02790_001 I 0.708
LPERR02G00370 Leersia perrieri LPERR02G00370 I 0.729
LPERR06G00470 Leersia perrieri LPERR06G00470 I 0.708
LPERR08G18330 Leersia perrieri LPERR08G18330 I 0.708
LPERR10G12950 Leersia perrieri LPERR10G12950 I 0.708
Lus10015766.g Linum usitatissimum Lus10015766.g I 0.771
Lus10035029.g Linum usitatissimum Lus10035029.g N 0.771
Lus10037039.g Linum usitatissimum Lus10037039.g I 0.750
MADS56 Oryza sativa OS10G0536100 I 0.708
MADS56 Oryza indica BGIOSGA033356 I 0.708
MLOC_76418 Hordeum vulgare MLOC_76418 I 0.729
MTR_8g033220 Medicago truncatula MTR_8g033220 I 0.708
OB06G10570 Oryza brachyantha OB06G10570 I 0.708
OB10G24040 Oryza brachyantha OB10G24040 I 0.708
OB12G20680 Oryza brachyantha OB12G20680 I 0.708
OBART02G00360 Oryza barthii OBART02G00360 I 0.729
OBART08G21560 Oryza barthii OBART08G21560 I 0.708
OBART10G16960 Oryza barthii OBART10G16960 I 0.708
OGLUM02G00350 Oryza glumaepatula OGLUM02G00350 I 0.729
OGLUM08G22840 Oryza glumaepatula OGLUM08G22840 I 0.708
OGLUM10G16960 Oryza glumaepatula OGLUM10G16960 I 0.708
OLONG_001786 Oryza longistaminata OLONG_001786 I 0.729
OLONG_017665 Oryza longistaminata OLONG_017665 I 0.708
OMERI02G09250 Oryza meridionalis OMERI02G09250 I 0.729
OMERI06G13650 Oryza meridionalis OMERI06G13650 I 0.708
OMERI10G13430 Oryza meridionalis OMERI10G13430 I 0.708
ONIVA02G00370 Oryza nivara ONIVA02G00370 I 0.729
ONIVA08G24570 Oryza nivara ONIVA08G24570 I 0.708
ONIVA10G18680 Oryza nivara ONIVA10G18680 I 0.708
OPUNC02G00040 Oryza punctata OPUNC02G00040 I 0.729
OPUNC06G00450 Oryza punctata OPUNC06G00450 I 0.708
OPUNC10G15300 Oryza punctata OPUNC10G15300 I 0.729
ORGLA02G0003200 Oryza glaberrima ORGLA02G0003200 I 0.729
ORGLA08G0229900 Oryza glaberrima ORGLA08G0229900 I 0.708
ORGLA10G0119200 Oryza glaberrima ORGLA10G0119200 I 0.708
ORUFI02G00390 Oryza rufipogon ORUFI02G00390 I 0.729
ORUFI08G24040 Oryza rufipogon ORUFI08G24040 I 0.708
ORUFI10G17990 Oryza rufipogon ORUFI10G17990 I 0.708
OS02G0104100 Oryza sativa OS02G0104100 I 0.729
OS08G0531900 Oryza sativa OS08G0531900 I 0.708
Pavir.Aa03568 Panicum virgatum Pavir.Aa03568 I 0.729
Pavir.Ab00058 Panicum virgatum Pavir.Ab00058 I 0.708
Pavir.J26790 Panicum virgatum Pavir.J26790 I 0.708
PK01844.1 Cannabis sativa PK01844.1 I 0.708
POPTR_0001s13660 Populus trichocarpa POPTR_0001s13660 I 0.750
Sb04g000500 Sorghum bicolor Sb04g000500 I 0.729
Sb07g026180 Sorghum bicolor Sb07g026180 I 0.708
Si014540m.g Setaria italica Si014540m.g I 0.708
Si019985m.g Setaria italica Si019985m.g I 0.729
TCM_008716 Theobroma cacao TCM_008716 I 0.771
TCM_017242 Theobroma cacao TCM_017242 I 0.750
Thhalv10026205m.g Eutrema salsugineum Thhalv10026205m.g I 0.708
Traes_1AL_6B108514B Triticum aestivum Traes_1AL_6B108514B I 0.708
Traes_1AL_6F5982F88 Triticum aestivum Traes_1AL_6F5982F88 I 0.729
Traes_1BL_F1D5BF5F8 Triticum aestivum Traes_1BL_F1D5BF5F8 I 0.708
Traes_1DL_D5BBCA2D0 Triticum aestivum Traes_1DL_D5BBCA2D0 I 0.750
Traes_4DL_5633C0561 Triticum aestivum Traes_4DL_5633C0561 I 0.708
Traes_7DS_4DF7EB08F Triticum aestivum Traes_7DS_4DF7EB08F I 0.708
TRIUR3_18962 Triticum urartu TRIUR3_18962 I 0.708
TRIUR3_22964 Triticum urartu TRIUR3_22964 I 0.729
TRIUR3_32699 Triticum urartu TRIUR3_32699 I 0.708