CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
chr1.LjB17A22.80.nc
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
chr1.LjB17A22.80.nc
T259318_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.LjB17A22.80.nc
MADS box
42
89
KITNESNLQVSFCKRRQGLFKKASKLCTLCGVEMEIIVQSPSLNFFSF
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03167
Capronia coronata
A1O1_03167
I
A1O3_01925
Capronia epimyces
A1O3_01925
I
A1O7_04497
Cladophialophora yegresii
A1O7_04497
I
A1O9_00939
Exophiala aquamarina
A1O9_00939
I
A1Q1_07087
Trichosporon asahii
A1Q1_07087
I
AB06842.1
Alternaria brassicicola
AB06842.1
I
ACLA_039220
Aspergillus clavatus
CADACLAG00003763
I
ACRE_033300
Acremonium chrysogenum
ACRE_033300
I
ACRE_055860
Acremonium chrysogenum
ACRE_055860
I
AFUA_3G11330
Aspergillus fumigatus
CADAFUAG00005023
I
AGABI2DRAFT_191917
Agaricus bisporus
AGABI2DRAFT_191917
I
AMAG_06832
Allomyces macrogynus
AMAG_06832
N
ANIA_02911
Aspergillus nidulans
CADANIAG00010178
I
AOL_s00075g120
Arthrobotrys oligospora
AOL_s00075g120
I
asl-1
Neurospora crassa
NCU01345
D
atf1
Schizosaccharomyces pombe
SPBC29B5.01
I
atf2/7
Ciona intestinalis
ENSCING00000006645
I
AUEXF2481DRAFT_414412
Aureobasidium subglaciale
AUEXF2481DRAFT_414412
I
AWRI1499_3213
Brettanomyces bruxellensis
AWRI1499_3213
I
BAUCODRAFT_49676
Baudoinia compniacensis
BAUCODRAFT_49676
I
BBA_04813
Beauveria bassiana
BBA_04813
I
Bcin09g00920
Botrytis cinerea
Bcin09g00920
I
BDDG_06376
Blastomyces dermatitidis
BDDG_06376
I
BGHDH14_bgh04237
Blumeria graminis
BGHDH14_bgh04237
I
BN946_scf185043.g203
Trametes cinnabarina
BN946_scf185043.g203
I
CADAFLAG00002509
Aspergillus flavus
CADAFLAG00002509
I
CADANGAG00002223
Aspergillus niger
CADANGAG00002223
I
CADAORAG00001285
Aspergillus oryzae
CADAORAG00001285
I
CAOG_06753
Capsaspora owczarzaki
CAOG_06753
I
CapteG125951
Capitella teleta
CapteG125951
I
CC1G_00462
Coprinopsis cinerea
CC1G_00462
I
CCM_09124
Cordyceps militaris
CCM_09124
I
CERSUDRAFT_111539
Ceriporiopsis subvermispora
CERSUDRAFT_111539
I
CFIO01_09498
Colletotrichum fioriniae
CFIO01_09498
I
CGGC5_15082
Colletotrichum gloeosporioides
CGGC5_15082
I
CH063_00485
Colletotrichum higginsianum
CH063_00485
I
CHGG_00632
Chaetomium globosum
CHGG_00632
I
CIMG_03698
Coccidioides immitis
CIMG_03698
I
CMQ_683
Grosmannia clavigera
CMQ_683
I
CNB05690
Cryptococcus neoformans
CNB05690
I
Cob_09423
Colletotrichum orbiculare
Cob_09423
I
COCC4DRAFT_39469
Bipolaris maydis
COCC4DRAFT_39469
I
COCCADRAFT_110849
Bipolaris zeicola
COCCADRAFT_110849
I
COCMIDRAFT_100301
Bipolaris oryzae
COCMIDRAFT_100301
I
COCSADRAFT_216676
Bipolaris sorokiniana
COCSADRAFT_216676
I
COCVIDRAFT_84814
Bipolaris victoriae
COCVIDRAFT_84814
I
CPUR_07883
Claviceps purpurea
CPUR_07883
I
CSUB01_02787
Colletotrichum sublineola
CSUB01_02787
I
CTHT_0051900
Chaetomium thermophilum
CTHT_0051900
I
CY34DRAFT_741442
Suillus luteus
CY34DRAFT_741442
I
DACRYDRAFT_24992
Dacryopinax sp
DACRYDRAFT_24992
I
DOTSEDRAFT_70140
Dothistroma septosporum
DOTSEDRAFT_70140
I
E5Q_04894
Mixia osmundae
E5Q_04894
I
EDP42815.1
Malassezia globosa
EDP42815.1
I
EPUS_07920
Endocarpon pusillum
EPUS_07920
I
estExt_fgenesh1_pg.C_130141
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_130141
I
estExt_fgenesh1_pg.C_150134
Monosiga brevicollis
estExt_fgenesh1_pg.C_150134
I
estExt_fgenesh1_pg.C_150146
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_150146
I
estExt_fgenesh1_pm.C_chr_10233
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_10233
I
estExt_fgenesh2_pg.C_10593
Neurospora discreta
estExt_fgenesh2_pg.C_10593
I
estExt_fgeneshMC_pg.C_20944
Mucor circinelloides
estExt_fgeneshMC_pg.C_20944
I
estExt_fgeneshMC_pg.C_50959
Mucor circinelloides
estExt_fgeneshMC_pg.C_50959
I
estExt_fgeneshPB_pg.C_340044
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_340044
I
estExt_Genewise1.C_41601
Heterobasidion annosum
estExt_Genewise1.C_41601
I
estExt_Genewise1.C_71204
Cryphonectria parasitica
estExt_Genewise1.C_71204
I
estExt_Genewise1Plus.C_sca_5_chr5_3_00629
Nectria haematococca
estExt_Genewise1Plus.C_sca_5_chr5_3_00629
I
EURHEDRAFT_81548
Aspergillus ruber
EURHEDRAFT_81548
I
EV44_g5736
Erysiphe necator
EV44_g5736
I
F503_00157
Ophiostoma piceae uamh
F503_00157
I
FFUJ_07310
Fusarium fujikuroi
FFUJ_07310
I
fgenesh1_pg.00866_#_392
Aspergillus carbonarius
fgenesh1_pg.00866_#_392
I
fgenesh1_pg.C_scaffold_2000291
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000291
I
fgeneshMC_pg.13_#_37
Mucor circinelloides
fgeneshMC_pg.13_#_37
I
fgeneshMC_pg.1_#_1383
Mucor circinelloides
fgeneshMC_pg.1_#_1383
I
fgeneshMC_pg.1_#_1409
Mucor circinelloides
fgeneshMC_pg.1_#_1409
I
fgeneshMC_pg.3_#_1354
Mucor circinelloides
fgeneshMC_pg.3_#_1354
I
fgeneshMC_pg.6_#_568
Mucor circinelloides
fgeneshMC_pg.6_#_568
I
fgeneshMC_pg.7_#_563
Mucor circinelloides
fgeneshMC_pg.7_#_563
I
fgeneshMC_pg.8_#_226
Mucor circinelloides
fgeneshMC_pg.8_#_226
I
fgeneshPB_pg.18__184
Phycomyces blakesleeanus
fgeneshPB_pg.18__184
N
fgeneshPB_pg.27__110
Phycomyces blakesleeanus
fgeneshPB_pg.27__110
I
fgeneshPB_pg.4__354
Phycomyces blakesleeanus
fgeneshPB_pg.4__354
I
fgeneshPB_pg.5__109
Phycomyces blakesleeanus
fgeneshPB_pg.5__109
I
fgeneshPB_pg.6__495
Phycomyces blakesleeanus
fgeneshPB_pg.6__495
I
fgeneshTM_pg.15_#_170
Tremella mesenterica
fgeneshTM_pg.15_#_170
I
FGRRES_10142
Fusarium graminearum
FGRRES_10142
I
FOMPIDRAFT_162112
Fomitopsis pinicola
FOMPIDRAFT_162112
I
FOXG_05265
Fusarium oxysporum
FOXG_05265
I
FOXG_07028
Fusarium oxysporum
FOXG_07028
I
FOXG_07083
Fusarium oxysporum
FOXG_07083
I
FOXG_07100
Fusarium oxysporum
FOXG_07100
I
FPSE_02636
Fusarium pseudograminearum
FPSE_02636
I
FVEG_02866
Fusarium verticillioides
FVEG_02866
I
G647_04191
Cladophialophora carrionii
G647_04191
I
GALMADRAFT_205475
Galerina marginata
GALMADRAFT_205475
I
GGTG_00729
Gaeumannomyces graminis
GGTG_00729
I
GLOINDRAFT_28660
Rhizophagus irregularis
GLOINDRAFT_28660
I
GLOTRDRAFT_136480
Gloeophyllum trabeum
GLOTRDRAFT_136480
I
GLRG_04311
Colletotrichum graminicola
GLRG_04311
I
GMDG_05754
Pseudogymnoascus destructans
GMDG_05754
I
GSTUM_00002889001
Tuber melanosporum
GSTUM_00002889001
I
H072_1333
Dactylellina haptotyla
H072_1333
I
HCBG_06790
Histoplasma capsulatum
HCBG_06790
I
HETIRDRAFT_473165
Heterobasidion irregulare
HETIRDRAFT_473165
I
HMPREF1120_06731
Exophiala dermatitidis
HMPREF1120_06731
I
HMPREF1541_01690
Cyphellophora europaea
HMPREF1541_01690
I
HMPREF1624_04302
Sporothrix schenckii
HMPREF1624_04302
I
J056_000237
Wallemia ichthyophaga
J056_000237
I
JAAARDRAFT_52880
Jaapia argillacea
JAAARDRAFT_52880
I
JL09_g3709
Pichia kudriavzevii
JL09_g3709
I
K437DRAFT_253963
Tilletiaria anomala
K437DRAFT_253963
I
K443DRAFT_84795
Laccaria amethystina
K443DRAFT_84795
I
L804_02374
Cryptococcus gattii
L804_02374
I
LACBIDRAFT_312016
Laccaria bicolor
LACBIDRAFT_312016
I
LEMA_P001490.1
Leptosphaeria maculans
LEMA_P001490.1
I
M378DRAFT_938054
Amanita muscaria
M378DRAFT_938054
I
M407DRAFT_17240
Tulasnella calospora
M407DRAFT_17240
I
M408DRAFT_52746
Serendipita vermifera
M408DRAFT_52746
I
M437DRAFT_75856
Aureobasidium melanogenum
M437DRAFT_75856
I
M438DRAFT_184342
Aureobasidium pullulans
M438DRAFT_184342
I
M7I_5710
Glarea lozoyensis
M7I_5710
I
MAJ_05238
Metarhizium majus
MAJ_05238
I
MAM_05099
Metarhizium album
MAM_05099
I
MAPG_05500
Magnaporthe poae
MAPG_05500
I
MBM_07911
Marssonina brunnea
MBM_07911
I
MBR_04276
Metarhizium brunneum
MBR_04276
I
MELLADRAFT_106426
Melampsora laricipopulina
MELLADRAFT_106426
I
MGG_08212
Magnaporthe oryzae
MGG_08212
I
MGU_04987
Metarhizium guizhouense
MGU_04987
I
Moror_1610
Moniliophthora roreri
Moror_1610
I
MPH_10839
Macrophomina phaseolina
MPH_10839
I
MYCFIDRAFT_97819
Pseudocercospora fijiensis
MYCFIDRAFT_97819
I
Mycgr3G98304
Zymoseptoria tritici
Mycgr3G98304
I
NechaG69482
Fusarium solani
NechaG69482
I
NEUTE1DRAFT_57442
Neurospora tetrasperma
NEUTE1DRAFT_57442
I
NFIA_065970
Neosartorya fischeri
CADNFIAG00005978
I
OIDMADRAFT_24756
Oidiodendron maius
OIDMADRAFT_24756
I
PAAG_01945
Paracoccidioides sp lutzii
PAAG_01945
I
PABG_02218
Paracoccidioides brasiliensis
PABG_02218
I
PaG_04331
Pseudozyma aphidis
PaG_04331
I
PAN0_139d6799
Pseudozyma antarctica
PAN0_139d6799
I
PAXRUDRAFT_131463
Paxillus rubicundulus
PAXRUDRAFT_131463
I
Pc13g09580
Penicillium chrysogenum
Pc13g09580
I
PCH_Pc13g09580
Penicillium rubens
PCH_Pc13g09580
I
PDE_04903
Penicillium oxalicum
PDE_04903
I
PDIP_29710
Penicillium digitatum
PDIP_29710
I
PEX1_106440
Penicillium expansum
PEX1_106440
I
PFICI_13363
Pestalotiopsis fici
PFICI_13363
I
PFL1_04831
Pseudozyma flocculosa
PFL1_04831
I
PGTG_22530
Puccinia graminis
PGTG_22530
I
PHACADRAFT_81811
Phanerochaete carnosa
PHACADRAFT_81811
I
PHLGIDRAFT_294586
Phlebiopsis gigantea
PHLGIDRAFT_294586
I
PHSY_000323
Pseudozyma hubeiensis
PHSY_000323
I
PIIN_07540
Piriformospora indica
PIIN_07540
I
PILCRDRAFT_68867
Piloderma croceum
PILCRDRAFT_68867
I
PISMIDRAFT_535672
Pisolithus microcarpus
PISMIDRAFT_535672
I
PITC_062200
Penicillium italicum
PITC_062200
I
PLEOSDRAFT_1092726
Pleurotus ostreatus
PLEOSDRAFT_1092726
I
PMAA_023170
Talaromyces marneffei
PMAA_023170
I
PMAA_023170
Penicillium marneffei
PMAA_023170
I
PODANS_2_1280
Podospora anserina
PODANS_2_1280
I
POSPLDRAFT_93466
Postia placenta
POSPLDRAFT_93466
I
PSEUBRA_SCAF23g05176
Pseudozyma brasiliensis
PSEUBRA_SCAF23g05176
I
PTTG_03490
Puccinia triticina
PTTG_03490
I
PTT_11563
Pyrenophora teres
PTT_11563
I
PV04_04779
Capronia semiimmersa
PV04_04779
I
PV05_01676
Exophiala xenobiotica
PV05_01676
I
PV06_04364
Exophiala oligosperma
PV06_04364
I
PV07_07561
Cladophialophora immunda
PV07_07561
I
PV08_10259
Exophiala spinifera
PV08_10259
I
PV09_06343
Verruconis gallopava
PV09_06343
I
PV10_00096
Exophiala mesophila
PV10_00096
I
PV11_05009
Exophiala sideris
PV11_05009
I
PVAR5_7724
Byssochlamys spectabilis
PVAR5_7724
I
RHTO_06855
Rhodosporidium toruloides
RHTO_06855
I
RO3G_01772
Rhizopus oryzae
RO3G_01772
I
RO3G_02213
Rhizopus oryzae
RO3G_02213
I
RO3G_05311
Rhizopus oryzae
RO3G_05311
I
RO3G_05746
Rhizopus oryzae
RO3G_05746
I
RO3G_06379
Rhizopus oryzae
RO3G_06379
I
RO3G_06463
Rhizopus oryzae
RO3G_06463
N
RO3G_07073
Rhizopus oryzae
RO3G_07073
I
RO3G_07557
Rhizopus oryzae
RO3G_07557
I
RO3G_11082
Rhizopus oryzae
RO3G_11082
I
RO3G_12109
Rhizopus oryzae
RO3G_12109
I
RTG_00632
Rhodotorula glutinis
RTG_00632
I
S40285_01279
Stachybotrys chlorohalonata
S40285_01279
I
S40288_09027
Stachybotrys chartarum
S40288_09027
I
SAPIO_CDS10626
Scedosporium apiospermum
SAPIO_CDS10626
I
SBOR_9967
Sclerotinia borealis
SBOR_9967
I
SCHCODRAFT_80526
Schizophyllum commune
SCHCODRAFT_80526
I
SCLCIDRAFT_20778
Scleroderma citrinum
SCLCIDRAFT_20778
I
SEPMUDRAFT_147966
Sphaerulina musiva
SEPMUDRAFT_147966
I
SERLA73DRAFT_103434
Serpula lacrymans
SERLA73DRAFT_103434
I
SETTUDRAFT_28157
Setosphaeria turcica
SETTUDRAFT_28157
I
SJAG_00266
Schizosaccharomyces japonicus
SJAG_00266
I
SJAG_01725
Schizosaccharomyces japonicus
SJAG_01725
I
SMAC_04034
Sordaria macrospora
SMAC_04034
I
SNAPOd2T00018494001
Oikopleura dioica
SNAPOd2T00018494001
I
SNOG_05677
Stagonospora nodorum
SNOG_05677
I
SNOG_05677
Phaeosphaeria nodorum
SNOG_05677
I
SOCG_00021
Schizosaccharomyces octosporus
SOCG_00021
I
SPBR_05727
Sporothrix brasiliensis
SPBR_05727
I
SPOG_04456
Schizosaccharomyces cryophilus
SPOG_04456
I
SPPG_01131
Spizellomyces punctatus
SPPG_01131
I
SPPG_03108
Spizellomyces punctatus
SPPG_03108
I
sr16890
Sporisorium reilianum
sr16890
I
SS1G_04913
Sclerotinia sclerotiorum
SS1G_04913
I
THITE_2106467
Thielavia terrestris
THITE_2106467
I
TRIATDRAFT_39837
Trichoderma atroviride
TRIATDRAFT_39837
I
TRIREDRAFT_103372
Trichoderma reesei
TRIREDRAFT_103372
I
TRIVIDRAFT_229017
Trichoderma virens
TRIVIDRAFT_229017
I
TSTA_031640
Talaromyces stipitatus
TSTA_031640
I
U727_00433320411
Penicillium solitum
U727_00433320411
I
UCREL1_7956
Eutypa lata
UCREL1_7956
I
UCRNP2_7443
Neofusicoccum parvum
UCRNP2_7443
I
UCRPA7_4570
Togninia minima
UCRPA7_4570
I
UHOR_09005
Ustilago hordei
UHOR_09005
I
UREG_07457
Uncinocarpus reesii
UREG_07457
I
UV8b_5734
Ustilaginoidea virens
UV8b_5734
I
V499_05475
Pseudogymnoascus pannorum
V499_05475
I
V565_052940
Rhizoctonia solani
V565_052940
I
VDAG_08676
Verticillium dahliae
VDAG_08676
I
VHEMI00377
Torrubiella hemipterigena
VHEMI00377
I
W97_02473
Coniosporium apollinis
W97_02473
I
WALSEDRAFT_69295
Wallemia sebi
WALSEDRAFT_69295
I
X797_004353
Metarhizium robertsii
X797_004353
I
YALI0_C16863g
Yarrowia lipolytica
YALI0_C16863g
I
Z517_11227
Fonsecaea pedrosoi
Z517_11227
I
Z518_09780
Rhinocladiella mackenziei
Z518_09780
I
Z519_09652
Cladophialophora bantiana
Z519_09652
I