Alligator_sinensis_CCG020665.1 (Alligator sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Alligator_sinensis_CCG020665.1 T261225_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SETDB1
M11031_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SETDB1_01 		0.933 0.933
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG020665.1 MBD 88 162

Links

Other MBD family TFs
Other Alligator sinensis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10007606 Chelonia mydas Cmyd_10007606 I 0.960
ENSAMEG00000001160 Ailuropoda melanoleuca ENSAMEG00000001160 I 0.933
ENSAPLG00000013908 Anas platyrhynchos ENSAPLG00000013908 I 0.973
ENSBTAP00000000107-D1 Bos grunniens ENSBTAP00000000107-D1 I 0.933
ENSCSAG00000018034 Chlorocebus sabaeus ENSCSAG00000018034 I 0.933
ENSGALG00000029138 Gallus gallus ENSGALG00000029138 I 0.947
ENSGMOG00000005993 Gadus morhua ENSGMOG00000005993 I 0.787
ENSLACG00000011159 Latimeria chalumnae ENSLACG00000011159 I 0.867
ENSLOCG00000006560 Lepisosteus oculatus ENSLOCG00000006560 I 0.771
ENSMEUG00000000555 Macropus eugenii ENSMEUG00000000555 I 0.840
ENSMEUG00000006544 Macropus eugenii ENSMEUG00000006544 I 0.920
ENSMPUG00000004298 Mustela putorius furo ENSMPUG00000004298 I 0.933
ENSNLEG00000009996 Nomascus leucogenys ENSNLEG00000009996 I 0.851
ENSOANG00000028880 Ornithorhynchus anatinus ENSOANG00000028880 I 0.879
ENSOARG00000020880 Ovis aries ENSOARG00000020880 I 0.933
ENSONIG00000006454 Oreochromis niloticus ENSONIG00000006454 I 0.787
ENSP00000357965 Macaca fascicularis ENSP00000357965 I 0.933
ENSPANG00000020214 Papio anubis ENSPANG00000020214 I 0.933
ENSPFOG00000004429 Poecilia formosa ENSPFOG00000004429 I 0.787
ENSPFOG00000004623 Poecilia formosa ENSPFOG00000004623 I 0.787
ENSPPYG00000000887 Pongo abelii ENSPPYG00000000887 I 0.933
ENSPSIG00000008407 Pelodiscus sinensis ENSPSIG00000008407 I 0.973
ENSSHAG00000012701 Sarcophilus harrisii ENSSHAG00000012701 I 0.920
ENSSTOG00000006770 Ictidomys tridecemlineatus ENSSTOG00000006770 I 0.933
ENSXMAG00000016600 Xiphophorus maculatus ENSXMAG00000016600 I 0.787
Myotis_brandtii_SETDB1_10031834 Myotis brandtii Myotis_brandtii_SETDB1_10031834 I 0.920
Pvit_04977 Pogona vitticeps Pvit_04977 I 0.933
Setdb1 Rattus norvegicus ENSRNOG00000021143 I 0.920
SETDB1 Procavia capensis ENSPCAG00000002527 I 0.933
SETDB1 Pan troglodytes ENSPTRG00000001267 I 0.933
SETDB1 Pteropus vampyrus ENSPVAG00000004355 I 0.933
SETDB1 Bos taurus ENSBTAG00000000098 I 0.933
SETDB1 Sus scrofa ENSSSCG00000006645 I 0.933
SETDB1 Tupaia belangeri ENSTBEG00000009306 I 0.933
SETDB1 Taeniopygia guttata ENSTGUG00000004684 I 0.947
SETDB1 Tursiops truncatus ENSTTRG00000006966 I 0.933
SETDB1 Vicugna pacos ENSVPAG00000005440 I 0.933
SETDB1 Canis familiaris ENSCAFG00000023501 I 0.933
SETDB1 Otolemur garnettii ENSOGAG00000010320 I 0.933
SETDB1 Homo sapiens ENSG00000143379 D 0.933
SETDB1 Gallus gallus ENSGALG00000024051 I 0.947
SETDB1 Felis catus ENSFCAG00000009655 I 0.933
SETDB1 Gorilla gorilla ENSGGOG00000016308 I 0.933
SETDB1 Erinaceus europaeus ENSEEUG00000015825 I 0.933
SETDB1 Equus caballus ENSECAG00000023954 I 0.933
SETDB1 Loxodonta africana ENSLAFG00000004006 I 0.933
Setdb1 Dipodomys ordii ENSDORG00000006830 I 0.933
SETDB1 Dasypus novemcinctus ENSDNOG00000007754 I 0.933
SETDB1 Meleagris gallopavo ENSMGAG00000001018 I 0.947
SETDB1 Microcebus murinus ENSMICG00000000425 I 0.701
SETDB1 Myotis lucifugus ENSMLUG00000010486 I 0.920
SETDB1 Macaca mulatta ENSMMUG00000023235 I 0.933
SETDB1 Monodelphis domestica ENSMODG00000018821 I 0.920
SETDB1 Cavia porcellus ENSCPOG00000001632 I 0.933
Setdb1 Mus musculus ENSMUSG00000015697 I 0.933
SETDB1 Callithrix jacchus ENSCJAG00000006972 I 0.933
SETDB1 Choloepus hoffmanni ENSCHOG00000004013 I 0.933
SETDB1 Oryctolagus cuniculus ENSOCUG00000003642 I 0.933
SETDB1 Ochotona princeps ENSOPRG00000015349 I 0.933
setdb1.L Xenopus laevis XB-GENE-866480 I 0.853
setdb1b Gasterosteus aculeatus ENSGACG00000011675 I 0.800
setdb1b Takifugu rubripes ENSTRUG00000014641 I 0.787
setdb1b Tetraodon nigroviridis ENSTNIG00000008065 I 0.733
setdb1b Oryzias latipes ENSORLG00000010602 I 0.787
setdb1b Danio rerio ENSDARG00000099021 I 0.773
XP_002935515 Xenopus tropicalis XP_002935515 I 0.853
XP_002935516 Xenopus tropicalis XP_002935516 I 0.853