CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.26484s0001
(
Capsella grandiflora
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Cagra.26484s0001
T261452_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.26484s0001.1.p
MBD
78
187
RKRAAPGDNWLPSGWRVEDKVRTSGATAGSVDKYYYEPNTGRKFRSRTEVLYYLQHGTSKKGAKKAENTDFNSDHLEGQGSNKAIRKAREPPRPSPPLDFDFKNPPEKVS
Links
Other
MBD
family TFs
Other
Capsella grandiflora
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000019195
Ailuropoda melanoleuca
ENSAMEG00000019195
I
ENSBTAP00000004817-D1
Bos grunniens
ENSBTAP00000004817-D1
I
ENSCPOG00000006167
Cavia porcellus
ENSCPOG00000006167
I
ENSCSAG00000000570
Chlorocebus sabaeus
ENSCSAG00000000570
I
ENSMICG00000008082
Microcebus murinus
ENSMICG00000008082
I
ENSMMUG00000004780
Macaca mulatta
ENSMMUG00000004780
I
ENSNLEG00000008964
Nomascus leucogenys
ENSNLEG00000008964
I
ENSOARG00000004280
Ovis aries
ENSOARG00000004280
I
ENSP00000320347
Macaca fascicularis
ENSP00000320347
I
ENSPANG00000012200
Papio anubis
ENSPANG00000012200
I
ENSPPYG00000007859
Pongo abelii
ENSPPYG00000007859
I
ENSSSCG00000025235
Sus scrofa
ENSSSCG00000025235
I
ENSSTOG00000021828
Ictidomys tridecemlineatus
ENSSTOG00000021828
I
ENSTSYG00000004346
Tarsius syrichta
ENSTSYG00000004346
I
Myotis_brandtii_ZFP3_10007485
Myotis brandtii
Myotis_brandtii_ZFP3_10007485
I
ZFP3
Myotis lucifugus
ENSMLUG00000007598
I
ZFP3
Otolemur garnettii
ENSOGAG00000027676
I
ZFP3
Loxodonta africana
ENSLAFG00000002940
I
ZFP3
Procavia capensis
ENSPCAG00000010125
I
ZFP3
Gorilla gorilla
ENSGGOG00000023389
I
ZFP3
Pan troglodytes
ENSPTRG00000008622
I
ZFP3
Pteropus vampyrus
ENSPVAG00000000910
I
Zfp3
Rattus norvegicus
ENSRNOG00000005009
I
ZFP3
Homo sapiens
ENSG00000180787
D
ZFP3
Equus caballus
ENSECAG00000002496
I
Zfp3
Dipodomys ordii
ENSDORG00000013955
I
ZFP3
Dasypus novemcinctus
ENSDNOG00000012978
I
ZFP3
Callithrix jacchus
ENSCJAG00000011539
I
ZFP3
Canis familiaris
ENSCAFG00000028732
I