orange1.1g001339m.g (Citrus sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 orange1.1g001339m.g T261577_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g001339m MBD 3 86
orange1.1g001339m MBD 124 211
orange1.1g001339m MBD 218 316
orange1.1g001342m MBD 3 86
orange1.1g001342m MBD 124 211
orange1.1g001342m MBD 218 316
orange1.1g001467m MBD 3 78
orange1.1g001467m MBD 101 188
orange1.1g001467m MBD 195 293
orange1.1g001493m MBD 95 182
orange1.1g001493m MBD 189 287
orange1.1g002106m MBD 3 87
orange1.1g002106m MBD 124 211
orange1.1g002106m MBD 217 316

Links

Other MBD family TFs
Other Citrus sinensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10028120m.g Citrus clementina Ciclev10028120m.g N
Cla016174 Citrullus lanatus Cla016174 N
orange1.1g008728m.g Citrus sinensis orange1.1g008728m.g N
TCM_006888 Theobroma cacao TCM_006888 N