CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_006888
(
Theobroma cacao
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
TCM_006888
T263696_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX98021
mTERF
146
242
ICMSKGNLDSIRRLVEWLKTVHVKAEFLGVTLLKSGDDILQRSIEELDEIVEYLESNGVKGDWMGFVISRCPKLLSYSIEEVKTRVEFYLNMGMNAN
EOX98021
mTERF
233
504
FYLNMGMNANDFGTMVFDYPGALGCFTLEEMNQKVNYLKEFGLSTEYVGRLLAFRPELMGCSIEEKWKPLVKYLYYLGISRDGMRRMLTIKPMVFCFNFETTIAPKVQFFRDLGVRDDAIGNMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVTEKDIGKVIALGPELLGCSIGNKLEVNMKYFLSLGIRHRQLGEMIADFPKLLRYKVDLLYPKYRYLRRTMVRPLQDVIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACTDEEFN
EOX98022
mTERF
242
345
SYPKIAKLICMSKGNLDSIRRLVEWLKTVHVKAEFLGVTLLKSGDDILQRSIEELDEIVEYLESNGVKGDWMGFVISRCPKLLSYSIEEVKTRVEFYLNMGMNA
EOX98022
mTERF
338
608
YLNMGMNANDFGTMVFDYPGALGCFTLEEMNQKVNYLKEFGLSTEYVGRLLAFRPELMGCSIEEKWKPLVKYLYYLGISRDGMRRMLTIKPMVFCFNFETTIAPKVQFFRDLGVRDDAIGNMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVTEKDIGKVIALGPELLGCSIGNKLEVNMKYFLSLGIRHRQLGEMIADFPKLLRYKVDLLYPKYRYLRRTMVRPLQDVIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACTDEEFN
EOX98023
mTERF
244
348
SYPKIAKLICMSKGNLDSIRRLVEWLKTVHVKAEFLGVTLLKSGDDILQRSIEELDEIVEYLESNGVKGDWMGFVISRCPKLLSYSIEEVKTRVEFYLNMGMNAN
EOX98023
mTERF
341
532
LNMGMNANDFGTMVFDYPGALGCFTLEEMNQKVNYLKEFGLSTEYVGRLLAFRPELMGCSIEEKWKPLVKYLYYLGISRDGMRRMLTIKPMVFCFNFETTIAPKVQFFRDLGVRDDAIGNMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVTEKDIGKVIALGPELLGCSIGNKLEVNMKYFLSLGIRHRQLG
Links
Other
mTERF
family TFs
Other
Theobroma cacao
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.013G037000
Gossypium raimondii
Gorai.013G037000
N
0.850
Ciclev10028120m.g
Citrus clementina
Ciclev10028120m.g
N
0.793
orange1.1g008728m.g
Citrus sinensis
orange1.1g008728m.g
N
0.791
EMB2219
Vitis vinifera
VIT_03s0063g02590
N
0.750
Cucsa.240560
Cucumis sativus
Cucsa.240560
N
0.734
Bo8g101540
Brassica oleracea
Bo8g101540
N
0.730
Carubv10022802m.g
Capsella rubella
Carubv10022802m.g
N
0.722
Thhalv10000085m.g
Eutrema salsugineum
Thhalv10000085m.g
N
0.712