CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.240560
(
Cucumis sativus
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cucsa.240560
T264404_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.240560.1
mTERF
89
188
SYPQIGKLICMSRGKLESIRRLVEWLKGIHVKGGYLGLTLTKAGGNILERSNEELDEIVDYLESNGVRMVWMGFVISRCPYLLSYNMEELKTRVEFFLNM
Cucsa.240560.1
mTERF
147
455
VDYLESNGVRMVWMGFVISRCPYLLSYNMEELKTRVEFFLNMGMNDKDFGTMVFDFPKVLGQYTFEDMNQKVNYLKEFGLENEDVGKLLAYKPQLMNCSIEDKWKPLVKYFYYLGISKDGLKRMLTIKPVVFCLDLETIIVPKVQFFKDVGVRDDGISNMLVKFPSLLTFSLYKKIRPVVIFLMTKAGVREKDVGKVIALGPELFGYSIVHKLEVNLKYYLSLGIYTRNLGEMITDFPMLLRYNIDILRPKYQYLRRTMVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRININLRSMLACTDEEFK
Links
Other
mTERF
family TFs
Other
Cucumis sativus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla016174
Citrullus lanatus
Cla016174
N
0.772
TCM_006888
Theobroma cacao
TCM_006888
N
0.734
Ciclev10028120m.g
Citrus clementina
Ciclev10028120m.g
N
0.704
orange1.1g008728m.g
Citrus sinensis
orange1.1g008728m.g
N
0.702