CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10000085m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10000085m.g
T265181_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10000085m
mTERF
134
322
MIAKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRVGDFVDHVMIEAAALKRLPEFSESRFNLRARKVIEDSNFVPLVRWLKHHEFSYNRIGKIICMSKGNLDSIRIMIEWLKTIHVKGEFIGVAFLRSGDNILQRSREELDEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKM
Thhalv10000085m
mTERF
315
589
RVDFFLKMGMNQHDFGTMVFDYPKILGFFSFQEMEKMISYLKEFGLSTEDVGRLLAFKPHLMGCSIEERWKPLVKYFYYLGISKEGMKRILFVKPILYCTDLEKTIAPKVRFFQDMGIPNEAIGNMIVKFPSLLTNSLYKKIRPVVIFLLSRAGVSQKNIGKVIALDPALLGCSIGTKLEPNMRYYVSLGIKIHQLGEMIADFPMLLRYNVDILRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHAIMVENRVNFKLRYMLACTDEEFE
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10022802m.g
Capsella rubella
Carubv10022802m.g
N
0.908
Bra031213
Brassica rapa
Bra031213
N
0.866
MTERF2
Arabidopsis thaliana
AT2G21710
N
0.850
Bo8g101540
Brassica oleracea
Bo8g101540
N
0.817
TCM_006888
Theobroma cacao
TCM_006888
N
0.712