CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra031213
(
Brassica rapa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bra031213
T262204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra031213.1-P
mTERF
130
315
KALEIRRRVTKEIIKESLVRKGRFGITYATNVTDRLGEFVDHVMIEAAALKRLPEFSETRFNLRARTVIEDSNFVPLVRWLKYHEFSYNRIGKIICMSKGNLDSIRIMIEWLKTIHVKGEFIGVAFLRSGDNILQRSREELDEIVEYLESNGVRRYWMGYVVGRCPELLSFSVEEVKTRVDFFLQM
Bra031213.1-P
mTERF
274
582
VEYLESNGVRRYWMGYVVGRCPELLSFSVEEVKTRVDFFLQMGMNQKDFGTMVFDYPKILGFFSFEEMEKKISYLKEFGLSTEDVGRLLAFKPHLMGCSIEERWKPLVKYFYYLGISKEGMKRILVVKPILYCIDLEKTIAPKVRFFQDMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVSQKDIGKVIAMDPALLGCSIGAKLEPNMRYYVSLGIRIHQLGEMIADFPMLLRYNVDILRPKYSYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTTMVENRVNFKLRFMLACTDEEFK
Links
Other
mTERF
family TFs
Other
Brassica rapa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10000085m.g
Eutrema salsugineum
Thhalv10000085m.g
N
0.866
Carubv10022802m.g
Capsella rubella
Carubv10022802m.g
N
0.841
Bo8g101540
Brassica oleracea
Bo8g101540
N
0.786
MTERF2
Arabidopsis thaliana
AT2G21710
N
0.774