CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10022802m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10022802m.g
T264667_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10022802m
mTERF
156
343
IVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGNFVDHVMIEAAAMKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHNEFSYNRIAKIICMSKGNLDSIRTMIEWLKTIHVKSEFIGVAFLRSGGNILQRSREELDDIVEYLESNGLRRDWMGFVVGRCPELLSFSMEEVKRRVNFFLQM
Carubv10022802m
mTERF
332
610
EVKRRVNFFLQMGMNQNDFGTMVFDYPKIIGYFSFEEMEKKINYLKEFGLSTEEVGRLLAFKPHIMGCSIEERWKPLVKYFYYLGISKEGMRRILVVKPILYCTDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQENIGKVIAMDPALLGCSIGTKLEPNMKYYISLGIRFHQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVQNRVNFKLRYMLACTDEEFE
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTERF2
Arabidopsis thaliana
AT2G21710
N
0.909
Thhalv10000085m.g
Eutrema salsugineum
Thhalv10000085m.g
N
0.908
Bo8g101540
Brassica oleracea
Bo8g101540
N
0.900
Bra031213
Brassica rapa
Bra031213
N
0.841
EMB2219
Arabidopsis lyrata
fgenesh2_kg.4__96__AT2G21710.1
N
0.729
TCM_006888
Theobroma cacao
TCM_006888
N
0.722