Pavir.Ib04134 (Panicum virgatum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pavir.Ib04134 T261605_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib04134.1.p MBD 19 91

Links

Other MBD family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
2111505A Xenopus laevis 2111505A I
Aan_R004820 Calypte anna Aan_R004820 I
Aan_R006139 Calypte anna Aan_R006139 I
Aan_R008719 Calypte anna Aan_R008719 I
Aan_R011092 Calypte anna Aan_R011092 I
AAY99628 Xenopus tropicalis AAY99628 I
Afo_R007497 Aptenodytes forsteri Afo_R007497 I
Afo_R010307 Aptenodytes forsteri Afo_R010307 I
Afo_R010643 Aptenodytes forsteri Afo_R010643 I
Alligator_sinensis_CCG005119.1 Alligator sinensis Alligator_sinensis_CCG005119.1 I
Alligator_sinensis_CCG009407.1 Alligator sinensis Alligator_sinensis_CCG009407.1 I
Alligator_sinensis_CCG020348.1 Alligator sinensis Alligator_sinensis_CCG020348.1 I
Alligator_sinensis_CCG020800.1 Alligator sinensis Alligator_sinensis_CCG020800.1 I
BGLB013872 Biomphalaria glabrata BGLB013872 I
Brh_R011298 Buceros rhinoceros Brh_R011298 I
CapteG111699 Capitella teleta CapteG111699 I
CapteG169232 Capitella teleta CapteG169232 I
CGI_10016130 Crassostrea gigas CGI_10016130 I
Cmyd_10009140 Chelonia mydas Cmyd_10009140 I
Cmyd_10010338 Chelonia mydas Cmyd_10010338 I
Cmyd_10015861 Chelonia mydas Cmyd_10015861 I
ENSAMEG00000003939 Ailuropoda melanoleuca ENSAMEG00000003939 I
ENSAMEG00000018597 Ailuropoda melanoleuca ENSAMEG00000018597 I
ENSAMEG00000019191 Ailuropoda melanoleuca ENSAMEG00000019191 I
ENSAMEG00000019439 Ailuropoda melanoleuca ENSAMEG00000019439 I
ENSAMXG00000001281 Astyanax mexicanus ENSAMXG00000001281 I
ENSAMXG00000014944 Astyanax mexicanus ENSAMXG00000014944 I
ENSAMXG00000024826 Astyanax mexicanus ENSAMXG00000024826 I
ENSAMXG00000026481 Astyanax mexicanus ENSAMXG00000026481 I
ENSAMXG00000026500 Astyanax mexicanus ENSAMXG00000026500 I
ENSAPLG00000001566 Anas platyrhynchos ENSAPLG00000001566 I
ENSAPLG00000009187 Anas platyrhynchos ENSAPLG00000009187 I
ENSBTAP00000000728-D1 Bos grunniens ENSBTAP00000000728-D1 I
ENSBTAP00000002301-D1 Bos grunniens ENSBTAP00000002301-D1 I
ENSBTAP00000005381-D1 Bos grunniens ENSBTAP00000005381-D1 I
ENSCPOG00000002240 Cavia porcellus ENSCPOG00000002240 I
ENSCSAG00000018652 Chlorocebus sabaeus ENSCSAG00000018652 I
ENSCSAG00000019039 Chlorocebus sabaeus ENSCSAG00000019039 I
ENSCSAG00000019605 Chlorocebus sabaeus ENSCSAG00000019605 I
ENSDORG00000012142 Dipodomys ordii ENSDORG00000012142 I
ENSFALG00000000552 Ficedula albicollis ENSFALG00000000552 I
ENSFALG00000014089 Ficedula albicollis ENSFALG00000014089 I
ENSFALG00000015099 Ficedula albicollis ENSFALG00000015099 I
ENSFALG00000015273 Ficedula albicollis ENSFALG00000015273 I
ENSGALG00000012235 Gallus gallus ENSGALG00000012235 I
ENSGALG00000024396 Gallus gallus ENSGALG00000024396 I
ENSGALG00000028276 Gallus gallus ENSGALG00000028276 I
ENSGMOG00000000168 Gadus morhua ENSGMOG00000000168 I
ENSGMOG00000000887 Gadus morhua ENSGMOG00000000887 I
ENSGMOG00000006899 Gadus morhua ENSGMOG00000006899 I
ENSGMOG00000009610 Gadus morhua ENSGMOG00000009610 I
ENSGMOG00000014666 Gadus morhua ENSGMOG00000014666 I
ENSGMOG00000017265 Gadus morhua ENSGMOG00000017265 I
ENSLACG00000002237 Latimeria chalumnae ENSLACG00000002237 I
ENSLACG00000013009 Latimeria chalumnae ENSLACG00000013009 I
ENSLACG00000013264 Latimeria chalumnae ENSLACG00000013264 I
ENSLACG00000016624 Latimeria chalumnae ENSLACG00000016624 I
ENSLOCG00000012935 Lepisosteus oculatus ENSLOCG00000012935 I
ENSLOCG00000017518 Lepisosteus oculatus ENSLOCG00000017518 I
ENSLOCG00000017829 Lepisosteus oculatus ENSLOCG00000017829 I
ENSLOCG00000018210 Lepisosteus oculatus ENSLOCG00000018210 I
ENSMEUG00000016098 Macropus eugenii ENSMEUG00000016098 I
ENSMICG00000012663 Microcebus murinus ENSMICG00000012663 I
ENSMMUG00000002604 Macaca mulatta ENSMMUG00000002604 I
ENSMPUG00000005372 Mustela putorius furo ENSMPUG00000005372 I
ENSMPUG00000018960 Mustela putorius furo ENSMPUG00000018960 I
ENSMPUG00000019108 Mustela putorius furo ENSMPUG00000019108 I
ENSMPUG00000020084 Mustela putorius furo ENSMPUG00000020084 I
ENSNLEG00000000900 Nomascus leucogenys ENSNLEG00000000900 I
ENSNLEG00000006322 Nomascus leucogenys ENSNLEG00000006322 I
ENSNLEG00000015231 Nomascus leucogenys ENSNLEG00000015231 I
ENSNLEG00000017618 Nomascus leucogenys ENSNLEG00000017618 I
ENSOARG00000008435 Ovis aries ENSOARG00000008435 I
ENSOARG00000011334 Ovis aries ENSOARG00000011334 I
ENSOARG00000018394 Ovis aries ENSOARG00000018394 I
ENSONIG00000006878 Oreochromis niloticus ENSONIG00000006878 I
ENSONIG00000009263 Oreochromis niloticus ENSONIG00000009263 I
ENSONIG00000020540 Oreochromis niloticus ENSONIG00000020540 I
ENSONIG00000020931 Oreochromis niloticus ENSONIG00000020931 I
ENSONIG00000021173 Oreochromis niloticus ENSONIG00000021173 I
ENSONIG00000021273 Oreochromis niloticus ENSONIG00000021273 I
ENSORLG00000019867 Oryzias latipes ENSORLG00000019867 I
ENSP00000242994 Macaca fascicularis ENSP00000242994 I
ENSP00000242994-D1 Bos grunniens ENSP00000242994-D1 I
ENSP00000295108 Macaca fascicularis ENSP00000295108 I
ENSP00000297142 Macaca fascicularis ENSP00000297142 I
ENSPANG00000007303 Papio anubis ENSPANG00000007303 I
ENSPANG00000021818 Papio anubis ENSPANG00000021818 I
ENSPANG00000024988 Papio anubis ENSPANG00000024988 I
ENSPFOG00000005949 Poecilia formosa ENSPFOG00000005949 I
ENSPFOG00000008824 Poecilia formosa ENSPFOG00000008824 I
ENSPFOG00000014944 Poecilia formosa ENSPFOG00000014944 I
ENSPFOG00000019942 Poecilia formosa ENSPFOG00000019942 I
ENSPFOG00000020285 Poecilia formosa ENSPFOG00000020285 I
ENSPMAG00000007548 Petromyzon marinus ENSPMAG00000007548 I
ENSPPYG00000004613 Pongo abelii ENSPPYG00000004613 I
ENSPPYG00000008486 Pongo abelii ENSPPYG00000008486 I
ENSPPYG00000017666 Pongo abelii ENSPPYG00000017666 I
ENSPPYG00000029484 Pongo abelii ENSPPYG00000029484 I
ENSPSIG00000000416 Pelodiscus sinensis ENSPSIG00000000416 I
ENSPSIG00000001006 Pelodiscus sinensis ENSPSIG00000001006 I
ENSPSIG00000001535 Pelodiscus sinensis ENSPSIG00000001535 I
ENSPSIG00000001952 Pelodiscus sinensis ENSPSIG00000001952 I
ENSSHAG00000008330 Sarcophilus harrisii ENSSHAG00000008330 I
ENSSHAG00000009773 Sarcophilus harrisii ENSSHAG00000009773 I
ENSSHAG00000015217 Sarcophilus harrisii ENSSHAG00000015217 I
ENSSSCG00000000300 Sus scrofa ENSSSCG00000000300 I
ENSSTOG00000002956 Ictidomys tridecemlineatus ENSSTOG00000002956 I
ENSSTOG00000019627 Ictidomys tridecemlineatus ENSSTOG00000019627 I
ENSSTOG00000020820 Ictidomys tridecemlineatus ENSSTOG00000020820 I
ENSSTOG00000024443 Ictidomys tridecemlineatus ENSSTOG00000024443 I
ENSTSYG00000003704 Tarsius syrichta ENSTSYG00000003704 I
ENSTSYG00000012547 Tarsius syrichta ENSTSYG00000012547 I
ENSXMAG00000001517 Xiphophorus maculatus ENSXMAG00000001517 I
ENSXMAG00000011061 Xiphophorus maculatus ENSXMAG00000011061 I
ENSXMAG00000019741 Xiphophorus maculatus ENSXMAG00000019741 I
ENSXMAG00000020272 Xiphophorus maculatus ENSXMAG00000020272 I
Gfo_R001419 Geospiza fortis Gfo_R001419 I
Gfo_R005849 Geospiza fortis Gfo_R005849 I
Gfo_R016263 Geospiza fortis Gfo_R016263 I
gw.499.29.1 Branchiostoma floridae gw.499.29.1 I
HelroG70666 Helobdella robusta HelroG70666 I
LotgiG59712 Lottia gigantea LotgiG59712 I
Myotis_brandtii_NEUROD1_10035039 Myotis brandtii Myotis_brandtii_NEUROD1_10035039 I
Myotis_brandtii_Neurod2_10030393 Myotis brandtii Myotis_brandtii_Neurod2_10030393 I
Myotis_brandtii_NEUROD4_10003502 Myotis brandtii Myotis_brandtii_NEUROD4_10003502 I
Myotis_brandtii_NEUROD6_10033978 Myotis brandtii Myotis_brandtii_NEUROD6_10033978 I
NEUROD1 Bos taurus ENSBTAG00000001755 I
NEUROD1 Callithrix jacchus ENSCJAG00000011529 I
NEUROD1 Cavia porcellus ENSCPOG00000025248 I
neurod1 Danio rerio ENSDARG00000019566 I
NEUROD1 Dasypus novemcinctus ENSDNOG00000012297 I
NEUROD1 Equus caballus ENSECAG00000012181 I
NEUROD1 Echinops telfairi ENSETEG00000018112 I
NEUROD1 Felis catus ENSFCAG00000004553 I
NEUROD1 Homo sapiens ENSG00000162992 D
neurod1 Gasterosteus aculeatus ENSGACG00000002064 I
NEUROD1 Gallus gallus ENSGALG00000008908 I
NEUROD1 Gorilla gorilla ENSGGOG00000027940 I
NEUROD1 Loxodonta africana ENSLAFG00000000612 I
NEUROD1 Myotis lucifugus ENSMLUG00000025259 I
NEUROD1 Macaca mulatta ENSMMUG00000008296 I
NEUROD1 Monodelphis domestica ENSMODG00000010392 I
Neurod1 Mus musculus ENSMUSG00000034701 D
NEUROD1 Ornithorhynchus anatinus ENSOANG00000003630 I
NEUROD1 Otolemur garnettii ENSOGAG00000025613 I
NEUROD1 Ochotona princeps ENSOPRG00000008607 I
neurod1 Oryzias latipes ENSORLG00000010563 I
NEUROD1 Procavia capensis ENSPCAG00000008927 I
NEUROD1 Pan troglodytes ENSPTRG00000012702 I
Neurod1 Rattus norvegicus ENSRNOG00000005609 I
NEUROD1 Sorex araneus ENSSARG00000008648 I
NEUROD1 Sus scrofa ENSSSCG00000016011 I
neurod1 Tetraodon nigroviridis ENSTNIG00000003533 I
neurod1 Takifugu rubripes ENSTRUG00000014252 I
NEUROD1 Tursiops truncatus ENSTTRG00000016757 I
neurod1 Xenopus tropicalis XB-GENE-963757 I
neurod1.L Xenopus laevis XB-GENE-6252655 I
neurod1.S Xenopus laevis XB-GENE-963762 I
NEUROD2 Anolis carolinensis ENSACAG00000017561 I
NEUROD2 Bos taurus ENSBTAG00000004119 I
NEUROD2 Canis familiaris ENSCAFG00000016407 I
NEUROD2 Callithrix jacchus ENSCJAG00000008704 I
neurod2 Danio rerio ENSDARG00000016854 I
NEUROD2 Dasypus novemcinctus ENSDNOG00000013872 I
NEUROD2 Equus caballus ENSECAG00000020811 I
NEUROD2 Felis catus ENSFCAG00000027653 I
NEUROD2 Homo sapiens ENSG00000171532 D
NEUROD2 Gasterosteus aculeatus ENSGACG00000008918 I
NEUROD2 Gorilla gorilla ENSGGOG00000000493 I
NEUROD2 Loxodonta africana ENSLAFG00000029558 I
NEUROD2 Macaca mulatta ENSMMUG00000001404 I
Neurod2 Mus musculus ENSMUSG00000038255 D
NEUROD2 Ornithorhynchus anatinus ENSOANG00000003622 I
NEUROD2 Oryctolagus cuniculus ENSOCUG00000023536 I
NEUROD2 Otolemur garnettii ENSOGAG00000010543 I
NEUROD2 Ochotona princeps ENSOPRG00000013289 I
NEUROD2 Oryzias latipes ENSORLG00000003441 I
NEUROD2 Pan troglodytes ENSPTRG00000009094 I
NEUROD2 Pteropus vampyrus ENSPVAG00000008509 I
NEUROD2 Taeniopygia guttata ENSTGUG00000016747 I
NEUROD2 Tetraodon nigroviridis ENSTNIG00000011718 I
NEUROD2 Takifugu rubripes ENSTRUG00000016237 I
NEUROD2 Tursiops truncatus ENSTTRG00000007210 I
neurod2 Xenopus tropicalis XB-GENE-1008512 I
NEUROD4 Anolis carolinensis ENSACAG00000014910 I
NEUROD4 Bos taurus ENSBTAG00000005626 I
NEUROD4 Canis familiaris ENSCAFG00000006347 I
NEUROD4 Callithrix jacchus ENSCJAG00000019123 I
NEUROD4 Cavia porcellus ENSCPOG00000002913 I
neurod4 Danio rerio ENSDARG00000003469 I
NEUROD4 Dasypus novemcinctus ENSDNOG00000009650 I
NEUROD4 Equus caballus ENSECAG00000001002 I
NEUROD4 Echinops telfairi ENSETEG00000009519 I
NEUROD4 Felis catus ENSFCAG00000013284 I
NEUROD4 Homo sapiens ENSG00000123307 I
NEUROD4 Gasterosteus aculeatus ENSGACG00000000702 I
neurod4 Gasterosteus aculeatus ENSGACG00000008952 I
NEUROD4 Gorilla gorilla ENSGGOG00000004295 I
NEUROD4 Loxodonta africana ENSLAFG00000029446 I
NEUROD4 Meleagris gallopavo ENSMGAG00000005085 I
NEUROD4 Microcebus murinus ENSMICG00000008491 I
NEUROD4 Myotis lucifugus ENSMLUG00000028491 I
Neurod4 Mus musculus ENSMUSG00000048015 I
NEUROD4 Ornithorhynchus anatinus ENSOANG00000011626 I
NEUROD4 Otolemur garnettii ENSOGAG00000009685 I
neurod4 Oryzias latipes ENSORLG00000007467 I
NEUROD4 Procavia capensis ENSPCAG00000002075 I
NEUROD4 Pan troglodytes ENSPTRG00000005049 I
Neurod4 Rattus norvegicus ENSRNOG00000008449 I
NEUROD4 Tupaia belangeri ENSTBEG00000000432 I
NEUROD4 Taeniopygia guttata ENSTGUG00000003762 I
NEUROD4 Tetraodon nigroviridis ENSTNIG00000000015 I
neurod4 Tetraodon nigroviridis ENSTNIG00000002442 I
neurod4 Takifugu rubripes ENSTRUG00000013273 I
NEUROD4 Takifugu rubripes ENSTRUG00000013677 I
NEUROD4 Tursiops truncatus ENSTTRG00000016039 I
NEUROD4 Vicugna pacos ENSVPAG00000012065 I
neurod4 Xenopus tropicalis XB-GENE-972704 I
neurod4.L Xenopus laevis XB-GENE-972708 I
NEUROD6 Anolis carolinensis ENSACAG00000009699 I
NEUROD6 Bos taurus ENSBTAG00000000558 I
NEUROD6 Canis familiaris ENSCAFG00000003122 I
NEUROD6 Callithrix jacchus ENSCJAG00000008997 I
NEUROD6 Cavia porcellus ENSCPOG00000006406 I
NEUROD6 Dasypus novemcinctus ENSDNOG00000014272 I
NEUROD6 Equus caballus ENSECAG00000020776 I
NEUROD6 Erinaceus europaeus ENSEEUG00000007073 I
NEUROD6 Felis catus ENSFCAG00000026161 I
NEUROD6 Homo sapiens ENSG00000164600 I
NEUROD6 Gorilla gorilla ENSGGOG00000026908 I
NEUROD6 Loxodonta africana ENSLAFG00000018034 I
NEUROD6 Meleagris gallopavo ENSMGAG00000012144 I
NEUROD6 Microcebus murinus ENSMICG00000012974 I
NEUROD6 Myotis lucifugus ENSMLUG00000017761 I
NEUROD6 Macaca mulatta ENSMMUG00000022699 I
NEUROD6 Monodelphis domestica ENSMODG00000013299 I
Neurod6 Mus musculus ENSMUSG00000037984 I
NEUROD6 Ornithorhynchus anatinus ENSOANG00000011606 I
NEUROD6 Otolemur garnettii ENSOGAG00000001911 I
NEUROD6 Ochotona princeps ENSOPRG00000006565 I
NEUROD6 Procavia capensis ENSPCAG00000005309 I
NEUROD6 Pan troglodytes ENSPTRG00000019050 I
NEUROD6 Pteropus vampyrus ENSPVAG00000014789 I
Neurod6 Rattus norvegicus ENSRNOG00000026055 I
NEUROD6 Tupaia belangeri ENSTBEG00000013747 I
NEUROD6 Taeniopygia guttata ENSTGUG00000001910 I
NEUROD6 Tursiops truncatus ENSTTRG00000000347 I
neurod6 Xenopus tropicalis XB-GENE-969227 I
neurod6.L Xenopus laevis XB-GENE-969232 I
neurod6a Danio rerio ENSDARG00000040008 I
neurod6b Danio rerio ENSDARG00000020794 I
neurod6b Gasterosteus aculeatus ENSGACG00000017176 I
neurod6b Oryzias latipes ENSORLG00000017789 I
neurod6b Tetraodon nigroviridis ENSTNIG00000018633 I
neurod6b Takifugu rubripes ENSTRUG00000000001 I
neurod6b Takifugu rubripes ENSTRUG00000012378 I
Ocbimv22021915m.g Octopus bimaculoides Ocbimv22021915m.g I
Ogr05448 Ophisaurus gracilis Ogr05448 I
Ogr07339 Ophisaurus gracilis Ogr07339 I
Ogr14107 Ophisaurus gracilis Ogr14107 I
Ogr16176 Ophisaurus gracilis Ogr16176 I
Pvit_05839 Pogona vitticeps Pvit_05839 I
Pvit_07639 Pogona vitticeps Pvit_07639 I
Pvit_17470 Pogona vitticeps Pvit_17470 I
Sakowv30011934m.g Saccoglossus kowalevskii Sakowv30011934m.g I
SMAR012298 Strigamia maritima SMAR012298 I
SPU_024918 Strongylocentrotus purpuratus SPU_024918 I
Tal_R006127 Tyto alba Tal_R006127 I