setdb1.L (Xenopus laevis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 XB-GENE-866480 T261682_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SETDB1
M11031_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SETDB1_01 		0.907 0.907
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH72374 MBD 620 694

Links

Other MBD family TFs
Other Xenopus laevis TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG020665.1 Alligator sinensis Alligator_sinensis_CCG020665.1 I 0.853
Cmyd_10007606 Chelonia mydas Cmyd_10007606 I 0.867
ENSAMEG00000001160 Ailuropoda melanoleuca ENSAMEG00000001160 I 0.907
ENSAPLG00000013908 Anas platyrhynchos ENSAPLG00000013908 I 0.880
ENSBTAP00000000107-D1 Bos grunniens ENSBTAP00000000107-D1 I 0.907
ENSCSAG00000018034 Chlorocebus sabaeus ENSCSAG00000018034 I 0.907
ENSGALG00000029138 Gallus gallus ENSGALG00000029138 I 0.867
ENSGMOG00000005993 Gadus morhua ENSGMOG00000005993 I 0.800
ENSLACG00000011159 Latimeria chalumnae ENSLACG00000011159 I 0.827
ENSMEUG00000000555 Macropus eugenii ENSMEUG00000000555 I 0.827
ENSMEUG00000006544 Macropus eugenii ENSMEUG00000006544 I 0.907
ENSMPUG00000004298 Mustela putorius furo ENSMPUG00000004298 I 0.907
ENSNLEG00000009996 Nomascus leucogenys ENSNLEG00000009996 I 0.811
ENSOARG00000020880 Ovis aries ENSOARG00000020880 I 0.907
ENSONIG00000006454 Oreochromis niloticus ENSONIG00000006454 I 0.800
ENSP00000357965 Macaca fascicularis ENSP00000357965 I 0.907
ENSPANG00000020214 Papio anubis ENSPANG00000020214 I 0.907
ENSPFOG00000004429 Poecilia formosa ENSPFOG00000004429 I 0.800
ENSPFOG00000004623 Poecilia formosa ENSPFOG00000004623 I 0.800
ENSPPYG00000000887 Pongo abelii ENSPPYG00000000887 I 0.907
ENSPSIG00000008407 Pelodiscus sinensis ENSPSIG00000008407 I 0.853
ENSSHAG00000012701 Sarcophilus harrisii ENSSHAG00000012701 I 0.907
ENSSTOG00000006770 Ictidomys tridecemlineatus ENSSTOG00000006770 I 0.907
ENSXMAG00000016600 Xiphophorus maculatus ENSXMAG00000016600 I 0.800
Myotis_brandtii_SETDB1_10031834 Myotis brandtii Myotis_brandtii_SETDB1_10031834 I 0.907
Pvit_04977 Pogona vitticeps Pvit_04977 I 0.840
SETDB1 Oryctolagus cuniculus ENSOCUG00000003642 I 0.907
SETDB1 Procavia capensis ENSPCAG00000002527 I 0.907
SETDB1 Vicugna pacos ENSVPAG00000005440 I 0.907
SETDB1 Tursiops truncatus ENSTTRG00000006966 I 0.907
SETDB1 Pan troglodytes ENSPTRG00000001267 I 0.907
SETDB1 Taeniopygia guttata ENSTGUG00000004684 I 0.840
SETDB1 Tupaia belangeri ENSTBEG00000009306 I 0.907
SETDB1 Pteropus vampyrus ENSPVAG00000004355 I 0.907
SETDB1 Sus scrofa ENSSSCG00000006645 I 0.907
Setdb1 Rattus norvegicus ENSRNOG00000021143 I 0.893
SETDB1 Ochotona princeps ENSOPRG00000015349 I 0.907
SETDB1 Bos taurus ENSBTAG00000000098 I 0.907
SETDB1 Canis familiaris ENSCAFG00000023501 I 0.907
SETDB1 Choloepus hoffmanni ENSCHOG00000004013 I 0.907
SETDB1 Callithrix jacchus ENSCJAG00000006972 I 0.907
SETDB1 Cavia porcellus ENSCPOG00000001632 I 0.907
SETDB1 Dasypus novemcinctus ENSDNOG00000007754 I 0.907
Setdb1 Dipodomys ordii ENSDORG00000006830 I 0.907
SETDB1 Equus caballus ENSECAG00000023954 I 0.907
SETDB1 Erinaceus europaeus ENSEEUG00000015825 I 0.907
SETDB1 Felis catus ENSFCAG00000009655 I 0.907
SETDB1 Homo sapiens ENSG00000143379 D 0.907
SETDB1 Gallus gallus ENSGALG00000024051 I 0.867
SETDB1 Gorilla gorilla ENSGGOG00000016308 I 0.907
SETDB1 Loxodonta africana ENSLAFG00000004006 I 0.907
SETDB1 Meleagris gallopavo ENSMGAG00000001018 I 0.867
SETDB1 Myotis lucifugus ENSMLUG00000010486 I 0.907
SETDB1 Macaca mulatta ENSMMUG00000023235 I 0.907
SETDB1 Monodelphis domestica ENSMODG00000018821 I 0.907
Setdb1 Mus musculus ENSMUSG00000015697 I 0.907
SETDB1 Otolemur garnettii ENSOGAG00000010320 I 0.907
setdb1b Gasterosteus aculeatus ENSGACG00000011675 I 0.813
setdb1b Tetraodon nigroviridis ENSTNIG00000008065 I 0.747
setdb1b Takifugu rubripes ENSTRUG00000014641 I 0.800
setdb1b Danio rerio ENSDARG00000099021 I 0.827
setdb1b Oryzias latipes ENSORLG00000010602 I 0.813
XP_002935515 Xenopus tropicalis XP_002935515 I 0.947
XP_002935516 Xenopus tropicalis XP_002935516 I 0.947