CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g039470
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo4g039470
T262133_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g039470.1
mTERF
23
205
PSLLTSTMSAALSSSLYISPKKPSSPQLSQSTKPTTIKTTLHTHPLFSVADQAVTLQMKEKILCLELMGIDSGKALSLNPFLRSASLDSVEAVLNFLQSKGIYPNDLPRILGMCPKILTSDIRTELNPVFTFLSSDLHVPDNAFRRVVKKCPRLLISTVEDQLKPALFYLQRLGFKDLDALAY
Bo4g039470.1
mTERF
198
316
KDLDALAYQDPVLLVSSVEHTLIPKLRFLESIGFSRSEAIGMILRCPALFTFSIENNFKPKLDYFMCEIKGKLENLKEFPQYFAFSLEKRIKPRHLKSMERGLELPLALMLKSTDEEFE
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT2G34620
Arabidopsis thaliana
AT2G34620
N
0.758
Cagra.3346s0013
Capsella grandiflora
Cagra.3346s0013
N
0.899
Carubv10023713m.g
Capsella rubella
Carubv10023713m.g
N
0.899
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.727
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.740
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.723
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.723
TCM_029419
Theobroma cacao
TCM_029419
N
0.734
Thhalv10016991m.g
Eutrema salsugineum
Thhalv10016991m.g
N
0.929