CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G047900
(
Gossypium raimondii
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Gorai.011G047900
T264861_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G047900.1
mTERF
35
184
PSKPKSLLHKHPLYSSAHHNLSLQIKEKILCLEIMGIDSGKALSLNPSLHTTSLDSLNSIISFLQSKGIHQKDFPRIFGMCPRILTSNIKTELGPVFSFLSQDLNVPENNYRKVINKCPRLLTSSVRDQLKPALFYLQRLGFKDLEALAY
Gorai.011G047900.1
mTERF
177
295
KDLEALAYQDPVLLVSSVEHTLIPKLKFLESIGFSTSEAKSMVLRCPGLFTFSIENNYKPKFEYFKEEMNGDLEDLKAFPQFFAFSLEKRIKPRHIETITSGVKLPLANMLKSTDDEFK
Links
Other
mTERF
family TFs
Other
Gossypium raimondii
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_029419
Theobroma cacao
TCM_029419
N
0.897
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.786
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.765
Cagra.3346s0013
Capsella grandiflora
Cagra.3346s0013
N
0.748
Carubv10023713m.g
Capsella rubella
Carubv10023713m.g
N
0.748
Thhalv10016991m.g
Eutrema salsugineum
Thhalv10016991m.g
N
0.748
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N
0.744
Bo4g039470
Brassica oleracea
Bo4g039470
N
0.740
Aquca_022_00242
Aquilegia coerulea
Aquca_022_00242
N
0.735
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
0.727
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.727
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
0.723
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.721
29599.m000171
Ricinus communis
29599.m000171
N
0.718
MDP0000233286
Malus domestica
MDP0000233286
N
0.718
orange1.1g035716m.g
Citrus sinensis
orange1.1g035716m.g
N
0.718
Ciclev10016031m.g
Citrus clementina
Ciclev10016031m.g
N
0.714
Pm010460
Prunus mume
Pm010460
N
0.710
chr6.CM0037.1460.nc
Lotus japonicus
chr6.CM0037.1460.nc
N
0.706