CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VIT_10s0003g04040
(
Vitis vinifera
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
VIT_10s0003g04040
T264101_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_10s0003g04040.t01
mTERF
87
232
KNVLQKHPLYTPAHSNLSLQFKEKILCLEIMGVDSGKALSLNPSLHTATLHSIHSIISFLQSKGIHQKDLGRIFGMCPKLLTSNIRTDLIPVFNFLSQDLKVPDQSFRRVINKCPRLLVSSVRDQLKPALIFLQRLGFQDLEALAH
VIT_10s0003g04040.t01
mTERF
225
343
QDLEALAHQDPVLLVSSVEKTLIPKLEYLVSLGMSRADAVGMVLRCPGLFTFSVENNFKPKFEYFVGEMEGNLEELKEFPQYFAFSLEKRIKPRHMEAVQNGVKVPLALMLKSTDEEFR
Links
Other
mTERF
family TFs
Other
Vitis vinifera
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.797
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.789
TCM_029419
Theobroma cacao
TCM_029419
N
0.768
MDP0000233286
Malus domestica
MDP0000233286
N
0.759
Aquca_022_00242
Aquilegia coerulea
Aquca_022_00242
N
0.755
Pm010460
Prunus mume
Pm010460
N
0.754
mgf005485m
Mimulus guttatus
mgf005485m
N
0.751
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.744
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.742
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
0.738
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.734
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
0.734
chr6.CM0037.1460.nc
Lotus japonicus
chr6.CM0037.1460.nc
N
0.726
Cla019852
Citrullus lanatus
Cla019852
N
0.717
Ciclev10016031m.g
Citrus clementina
Ciclev10016031m.g
N
0.713
29599.m000171
Ricinus communis
29599.m000171
N
0.709
orange1.1g035716m.g
Citrus sinensis
orange1.1g035716m.g
N
0.709